Martin David M A, Hill Pamela, Barton Geoffrey J, Flavell Andrew J
Post-Genomics and Molecular Interactions Centre, Wellcome Trust Biocentre, University of Dundee, Dundee DD1 5EH, UK.
Bioinformatics. 2003 May 22;19(8):1037-8. doi: 10.1093/bioinformatics/btg116.
An algorithm and software are described that provide a fast method to produce a novel, function-oriented visualization of the results of a sequence database search. Text mining of sequence annotations allows position specific plots of potential functional similarity to be compared in a simple compact representation.
The application can be accessed via a web server at http://www.compbio.dundee.ac.uk. The RHIMS software may be obtained by request to the authors.
本文描述了一种算法和软件,它们提供了一种快速方法,可对序列数据库搜索结果生成新颖的、面向功能的可视化展示。通过对序列注释进行文本挖掘,能够以简单紧凑的形式比较潜在功能相似性的位置特异性图谱。
可通过网页服务器http://www.compbio.dundee.ac.uk访问该应用程序。可向作者请求获取RHIMS软件。