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直接测定一氧化碳血红素蛋白卟啉 - 咪唑模型[Fe(TPP)(CO)(1 - MeIm)]中铁正常模式的完整集合。

Direct determination of the complete set of iron normal modes in a porphyrin-imidazole model for carbonmonoxy-heme proteins: [Fe(TPP)(CO)(1-MeIm)].

作者信息

Rai Brajesh K, Durbin Stephen M, Prohofsky Earl W, Sage J Timothy, Ellison Mary K, Roth Arne, Scheidt W Robert, Sturhahn Wolfgang, Alp E Ercan

机构信息

Department of Physics, Purdue University, West Lafayette, Indiana 47907, USA.

出版信息

J Am Chem Soc. 2003 Jun 11;125(23):6927-36. doi: 10.1021/ja028219w.

Abstract

Detailed Fe vibrational spectra have been obtained for the heme model complex [Fe(TPP)(CO)(1-MeIm)] using a new, highly selective and quantitative technique, Nuclear Resonance Vibrational Spectroscopy (NRVS). This spectroscopy measures the complete vibrational density of states for iron atoms, from which normal modes can be calculated via refinement of the force constants. These data and mode assignments can reveal previously undetected vibrations and are useful for validating predictions based on optical spectroscopies and density functional theory, for example. Vibrational modes of the iron porphyrin-imidazole compound [Fe(TPP)(CO)(1-MeIm)] have been determined by refining normal mode calculations to NRVS data obtained at an X-ray synchrotron source. Iron dynamics of this compound, which serves as a useful model for the active site in the six-coordinate heme protein, carbonmonoxy-myoglobin, are discussed in relation to recently determined dynamics of a five-coordinate deoxy-myoglobin model, [Fe(TPP)(2-MeHIm)]. For the first time in a six-coordinate heme system, the iron-imidazole stretch mode has been observed, at 226 cm(-)(1). The heme in-plane modes with large contributions from the nu(42), nu(49), nu(50), and nu(53) modes of the core porphyrin are identified. In general, the iron modes can be attributed to coupling with the porphyrin core, the CO ligand, the imidazole ring, and/or the phenyl rings. Other significant findings are the observation that the porphyrin ring peripheral substituents are strongly coupled to the iron doming mode and that the Fe-C-O tilting and bending modes are related by a negative interaction force constant.

摘要

使用一种全新的、高度选择性且定量的技术——核共振振动光谱法(NRVS),已获得了血红素模型配合物[Fe(TPP)(CO)(1-MeIm)]的详细铁振动光谱。这种光谱法可测量铁原子的完整振动态密度,通过对力常数进行精修,由此可计算出简正模式。例如,这些数据和模式归属能够揭示先前未检测到的振动,并且有助于验证基于光学光谱和密度泛函理论所做出的预测。通过将简正模式计算精修至在X射线同步辐射源处获得的NRVS数据,已确定了铁卟啉-咪唑化合物[Fe(TPP)(CO)(1-MeIm)]的振动模式。该化合物作为六配位血红素蛋白——一氧化碳肌红蛋白活性位点的有用模型,其铁动力学与最近确定的五配位脱氧肌红蛋白模型[Fe(TPP)(2-MeHIm)]的动力学相关。在六配位血红素体系中首次观察到铁-咪唑伸缩模式,位于226 cm⁻¹处。已识别出核心卟啉的ν(42)、ν(49)、ν(50)和ν(53)模式对血红素面内模式有较大贡献。一般来说,铁模式可归因于与卟啉核心、CO配体、咪唑环和/或苯环的耦合。其他重要发现包括观察到卟啉环周边取代基与铁穹顶模式强烈耦合,以及Fe-C-O倾斜和弯曲模式通过负相互作用力常数相关。

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