Department of Physics and Center for Interdisciplinary Research on Complex Systems, Northeastern University, Boston, Massachusetts 02115, USA.
J Chem Phys. 2011 Jul 7;135(1):015101. doi: 10.1063/1.3598473.
Nuclear resonance vibrational spectroscopy (NRVS) reveals the vibrational dynamics of a Mössbauer probe nucleus. Here, (57)Fe NRVS measurements yield the complete spectrum of Fe vibrations in halide complexes of iron porphyrins. Iron porphine serves as a useful symmetric model for the more complex spectrum of asymmetric heme molecules that contribute to numerous essential biological processes. Quantitative comparison with the vibrational density of states (VDOS) predicted for the Fe atom by density functional theory calculations unambiguously identifies the correct sextet ground state in each case. These experimentally authenticated calculations then provide detailed normal mode descriptions for each observed vibration. All Fe-ligand vibrations are clearly identified despite the high symmetry of the Fe environment. Low frequency molecular distortions and acoustic lattice modes also contribute to the experimental signal. Correlation matrices compare vibrations between different molecules and yield a detailed picture of how heme vibrations evolve in response to (a) halide binding and (b) asymmetric placement of porphyrin side chains. The side chains strongly influence the energetics of heme doming motions that control Fe reactivity, which are easily observed in the experimental signal.
核共振振动光谱(NRVS)揭示了穆斯堡尔探针原子核的振动动力学。在这里,(57)Fe NRVS 测量给出了铁卟啉卤化物配合物中 Fe 振动的完整光谱。铁卟啉是不对称血红素分子更复杂光谱的有用对称模型,血红素分子参与了许多重要的生物过程。与密度泛函理论计算预测的 Fe 原子振动态密度(VDOS)的定量比较,明确确定了每种情况下正确的 sextet 基态。这些经过实验验证的计算然后为每个观察到的振动提供了详细的正则模态描述。尽管 Fe 环境的对称性很高,但所有 Fe-配体振动都能被清晰识别。低频分子变形和声学晶格模式也为实验信号做出了贡献。相关矩阵比较了不同分子之间的振动,并详细描述了血红素振动如何响应(a)卤化物结合和(b)卟啉侧链的不对称排列而发生变化。侧链强烈影响控制 Fe 反应性的血红素成拱运动的能量学,这在实验信号中很容易观察到。