• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过涡虫ESTs的比较基因组学分析阐明中枢神经系统的起源和进化过程。

Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs.

作者信息

Mineta Katsuhiko, Nakazawa Masumi, Cebria Francesc, Ikeo Kazuho, Agata Kiyokazu, Gojobori Takashi

机构信息

Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Yata 1111, Mishima, Shizuoka 411-8540, Japan.

出版信息

Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7666-71. doi: 10.1073/pnas.1332513100. Epub 2003 Jun 11.

DOI:10.1073/pnas.1332513100
PMID:12802012
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC164645/
Abstract

Among the bilateral animals, a centralized nervous system is found in both the deuterostome and protostome. To address the question of whether the CNS was derived from a common ancestor of deuterostomes and protostomes, it is essential to know kinds of genes existed in the CNS of the putative common ancestor and to trace the evolutionary divergence of genes expressed in the CNS. To answer these questions, we took a comparative approach using different species, particularly focusing on one of the lower bilateral animals, the planarian (Platyhelminthes, Tricladida), which is known to possess a CNS. We determined the nucleotide sequence of ESTs from the head portion of planarians, obtaining 3,101 nonredundant EST clones. As a result of homology searches, we found that 116 clones had significant similarity to known genes related to the nervous system. Here, we compared these 116 planarian EST clones with all ORFs of the complete genome sequences of the human, fruit fly, and nematode, and showed that >95% of these 116 nervous system-related genes, including genes involved in brain or neural morphogenesis, were commonly shared among these organisms, thus providing evidence at the molecular level for the existence of a common ancestral CNS. Interestingly, we found that approximately 30% of planarian nervous system-related genes had homologous sequences in Arabidopsis and yeast, which do not possess a nervous system. This implies that the origin of nervous system-related genes greatly predated the emergence of the nervous system, and that these genes might have been recruited toward the nervous system.

摘要

在两侧对称动物中,后口动物和原口动物都有一个集中的神经系统。为了解决中枢神经系统是否起源于后口动物和原口动物的共同祖先这一问题,有必要了解假定共同祖先的中枢神经系统中存在的基因种类,并追踪中枢神经系统中表达的基因的进化分歧。为了回答这些问题,我们采用了比较不同物种的方法,特别关注一种较低等的两侧对称动物——涡虫(扁形动物门,三肠目),已知它拥有中枢神经系统。我们测定了涡虫头部的EST核苷酸序列,获得了3101个非冗余EST克隆。同源性搜索的结果表明,有116个克隆与已知的神经系统相关基因有显著相似性。在这里,我们将这116个涡虫EST克隆与人类、果蝇和线虫完整基因组序列的所有开放阅读框进行了比较,结果表明,这116个与神经系统相关的基因中,超过95%,包括参与脑或神经形态发生的基因,在这些生物中是共同存在的,从而在分子水平上为共同祖先中枢神经系统的存在提供了证据。有趣的是,我们发现大约30%的涡虫神经系统相关基因在拟南芥和酵母中具有同源序列,而拟南芥和酵母并不拥有神经系统。这意味着神经系统相关基因的起源远远早于神经系统的出现,并且这些基因可能是被招募到神经系统中的。

相似文献

1
Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs.通过涡虫ESTs的比较基因组学分析阐明中枢神经系统的起源和进化过程。
Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7666-71. doi: 10.1073/pnas.1332513100. Epub 2003 Jun 11.
2
Comparative transcriptome analysis between planarian Dugesia japonica and other platyhelminth species.涡虫(Dugesia japonica)与其他扁形动物物种的比较转录组分析。
BMC Genomics. 2012 Jun 29;13:289. doi: 10.1186/1471-2164-13-289.
3
The expression of neural-specific genes reveals the structural and molecular complexity of the planarian central nervous system.神经特异性基因的表达揭示了涡虫中枢神经系统的结构和分子复杂性。
Mech Dev. 2002 Aug;116(1-2):199-204. doi: 10.1016/s0925-4773(02)00134-x.
4
Search for the evolutionary origin of a brain: planarian brain characterized by microarray.探寻大脑的进化起源:以微阵列技术表征的涡虫大脑
Mol Biol Evol. 2003 May;20(5):784-91. doi: 10.1093/molbev/msg086. Epub 2003 Apr 2.
5
Expression and functional analysis of musashi-like genes in planarian CNS regeneration.涡虫中枢神经系统再生过程中类Musashi基因的表达及功能分析
Mech Dev. 2008 Jul;125(7):631-45. doi: 10.1016/j.mod.2008.03.002. Epub 2008 Mar 17.
6
Characterization of 954 bovine full-CDS cDNA sequences.954条牛全长编码序列(CDS)cDNA序列的特征分析
BMC Genomics. 2005 Nov 23;6:166. doi: 10.1186/1471-2164-6-166.
7
Comparative genome analyses of nervous system-specific genes.神经系统特异性基因的比较基因组分析。
Gene. 2006 Jan 3;365:130-6. doi: 10.1016/j.gene.2005.09.001. Epub 2005 Dec 20.
8
Dissecting planarian central nervous system regeneration by the expression of neural-specific genes.通过神经特异性基因的表达剖析涡虫中枢神经系统再生过程
Dev Growth Differ. 2002 Apr;44(2):135-46. doi: 10.1046/j.1440-169x.2002.00629.x.
9
An EST screen from the annelid Pomatoceros lamarckii reveals patterns of gene loss and gain in animals.来自环节动物拉氏盘管虫的一个EST筛选揭示了动物基因丢失和获得的模式。
BMC Evol Biol. 2009 Sep 25;9:240. doi: 10.1186/1471-2148-9-240.
10
The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: analysis of ESTs from the hermaphroditic strain.地中海涡虫作为表观遗传生殖细胞特化模型:雌雄同体品系的EST分析
Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18491-6. doi: 10.1073/pnas.0509507102. Epub 2005 Dec 12.

引用本文的文献

1
Statistical analysis of multi-endpoint phenotypic screening increases sensitivity of planarian neurotoxicity testing.多终点表型筛选的统计分析提高了涡虫神经毒性测试的灵敏度。
Toxicol Sci. 2025 Aug 21. doi: 10.1093/toxsci/kfaf117.
2
2024 International Academy of Toxicologic Pathology (IATP) Satellite Symposium: New Approach Methodologies (NAMs) for Neurotoxicity Assessment and Regulatory Perspectives.2024年国际毒理病理学会(IATP)卫星研讨会:神经毒性评估的新方法学(NAMs)及监管视角
Toxicol Pathol. 2025 Jun;53(4):305-320. doi: 10.1177/01926233251335719. Epub 2025 May 15.
3
How neurobehavior and brain development in alternative whole-organism models can contribute to prediction of developmental neurotoxicity.在替代性全生物体模型中,神经行为和大脑发育如何有助于预测发育性神经毒性。
Neurotoxicology. 2024 May;102:48-57. doi: 10.1016/j.neuro.2024.03.005. Epub 2024 Mar 28.
4
The brain is not mental! coupling neuronal and immune cellular processing in human organisms.大脑并非精神性的!人类机体中神经元与免疫细胞过程的耦合。
Front Integr Neurosci. 2023 May 17;17:1057622. doi: 10.3389/fnint.2023.1057622. eCollection 2023.
5
New Worm on the Block: Planarians in (Neuro)Toxicology.新出现的环节:涡虫在(神经)毒理学中的作用。
Curr Protoc. 2022 Dec;2(12):e637. doi: 10.1002/cpz1.637.
6
Reframing cognition: getting down to biological basics.重新构建认知:深入生物学基础。
Philos Trans R Soc Lond B Biol Sci. 2021 Mar 15;376(1820):20190750. doi: 10.1098/rstb.2019.0750. Epub 2021 Jan 25.
7
Different classes of small RNAs are essential for head regeneration in the planarian Dugesia japonica.不同种类的小 RNA 对于日本三角涡虫的头部再生是必不可少的。
BMC Genomics. 2020 Dec 7;21(1):876. doi: 10.1186/s12864-020-07234-1.
8
Extreme Environmental Stress-Induced Biological Responses in the Planarian.涡虫极端环境应激诱导的生物学响应。
Biomed Res Int. 2020 Jun 11;2020:7164230. doi: 10.1155/2020/7164230. eCollection 2020.
9
Dugesia japonica is the best suited of three planarian species for high-throughput toxicology screening.日本三角涡虫是三种涡虫中最适合高通量毒理学筛选的物种。
Chemosphere. 2020 Aug;253:126718. doi: 10.1016/j.chemosphere.2020.126718. Epub 2020 Apr 8.
10
5' tRNA halves are highly expressed in the primate hippocampus and might sequence-specifically regulate gene expression.5' tRNA halves 在灵长类海马体中高度表达,可能特异性地调节基因表达。
RNA. 2020 Jun;26(6):694-707. doi: 10.1261/rna.073395.119. Epub 2020 Mar 6.

本文引用的文献

1
Structure of the planarian central nervous system (CNS) revealed by neuronal cell markers.通过神经元细胞标记物揭示的涡虫中枢神经系统(CNS)结构
Zoolog Sci. 1998 Jun 1;15(3):433-40. doi: 10.2108/zsj.15.433.
2
Search for the evolutionary origin of a brain: planarian brain characterized by microarray.探寻大脑的进化起源:以微阵列技术表征的涡虫大脑
Mol Biol Evol. 2003 May;20(5):784-91. doi: 10.1093/molbev/msg086. Epub 2003 Apr 2.
3
The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration.地中海涡虫数据库作为研究扁形动物、干细胞和再生的分子资源。
Development. 2002 Dec;129(24):5659-65. doi: 10.1242/dev.00167.
4
FGFR-related gene nou-darake restricts brain tissues to the head region of planarians.与成纤维细胞生长因子受体(FGFR)相关的基因nou-darake将脑组织限制在涡虫的头部区域。
Nature. 2002 Oct 10;419(6907):620-4. doi: 10.1038/nature01042.
5
Induction of a noggin-like gene by ectopic DV interaction during planarian regeneration.
Dev Biol. 2002 Oct 1;250(1):59-70. doi: 10.1006/dbio.2002.0790.
6
The expression of neural-specific genes reveals the structural and molecular complexity of the planarian central nervous system.神经特异性基因的表达揭示了涡虫中枢神经系统的结构和分子复杂性。
Mech Dev. 2002 Aug;116(1-2):199-204. doi: 10.1016/s0925-4773(02)00134-x.
7
Planarian fibroblast growth factor receptor homologs expressed in stem cells and cephalic ganglions.在干细胞和脑神经节中表达的涡虫成纤维细胞生长因子受体同源物。
Dev Growth Differ. 2002 Jun;44(3):191-204. doi: 10.1046/j.1440-169x.2002.00634.x.
8
Molecular mechanisms of CaMKII activation in neuronal plasticity.神经元可塑性中CaMKII激活的分子机制。
Curr Opin Neurobiol. 2002 Jun;12(3):293-9. doi: 10.1016/s0959-4388(02)00327-6.
9
Dissecting planarian central nervous system regeneration by the expression of neural-specific genes.通过神经特异性基因的表达剖析涡虫中枢神经系统再生过程
Dev Growth Differ. 2002 Apr;44(2):135-46. doi: 10.1046/j.1440-169x.2002.00629.x.
10
Calibrating rates of early Cambrian evolution.校准寒武纪早期的演化速率。
Science. 1993 Sep 3;261:1293-8. doi: 10.1126/science.11539488.