Leadbetter Jared R
Environmental Science and Engineering WM Keck Laboratories, M/C 138-78 California Institute of Technology, Pasadena, CA 91125, USA.
Curr Opin Microbiol. 2003 Jun;6(3):274-81. doi: 10.1016/s1369-5274(03)00041-9.
Any talk of the demise of in vitro cultivation as a useful mechanism for revealing many of nature's past and present secrets appears to be unfounded and premature. The first years of this century have been as productive in the cultivation of physiologically novel, environmentally abundant and phylogenetically distinct microbes as were the first years of the 20th century. The diversity of organic and inorganic electron donors and acceptors known to be used during microbial energy metabolisms continues to grow, expanding our appreciation for the niches that may be, or historically may have been, filled by microbes in the biosphere. Either guided and instigated by, or independent of, the results of gene inventories representing diverse environmental settings, significant advances are constantly being made in the isolation of bacteria and archaea, demonstrating either strikingly rich phylogenetic diversity or significant activity and abundance in their respective environments. The potential synergisms between molecular ecological analyses and innovative in vitro growth studies are real and should be embraced, rather than treated as dueling agents in some zero-sum game.
任何认为体外培养作为揭示自然界许多过去和现在秘密的有用机制已走向衰落的说法似乎都毫无根据且为时过早。本世纪的头几年,在培养生理特性新奇、环境中数量丰富且系统发育上独特的微生物方面,与20世纪头几年一样富有成效。已知在微生物能量代谢过程中使用的有机和无机电子供体及受体的多样性持续增加,这使我们更加认识到生物圈中可能已被微生物占据或历史上曾被微生物占据的生态位。无论是受代表不同环境背景的基因清单结果的引导和推动,还是与之无关,在细菌和古菌的分离方面都不断取得重大进展,这些细菌和古菌要么显示出惊人丰富的系统发育多样性,要么在各自环境中具有显著的活性和丰度。分子生态学分析与创新性体外生长研究之间的潜在协同作用是切实存在的,应该加以利用,而不是在某种零和博弈中被视为相互竞争的因素。