Khan Sehaam, Sneddon Kate, Fielding Burtram, Ward Vernon, Davison Sean
Department of Biotechnology, University of the Western Cape, Modderdam Road, Bellville, 7535, Cape Town, South Africa.
Virus Genes. 2003 Aug;27(1):17-27. doi: 10.1023/a:1025116301321.
The ecdysteroid UDP-glucosyltransferase (egt) gene of a single enveloped nucleopolyhedrovirus was located using an Hz-SNPV gene-specific probe. This SNPV was found infecting a colony of Helicoverpa armigera (HaSNPV) in the Western Cape region of South Africa. The open reading frame of the HaSNPV-SA egt is 1.548 nucleotides long and encodes a predicted protein of 516 amino acids with a Mr of 58,897-kDa. The 5'-noncoding region contained an early transcription initiation motif (CAGT) and a baculovirus late transcription motif (ATAAG). A transcription enhancer sequence (GATA) was also identified. Two possible TATA boxes together with an AT rich region were also recognized. A putative signal peptide of 20 residues was present at the N-terminus of the predicted EGT sequence. A polyadenylation signal (AATAAA) was found downstream of the translation stop codon. Five Helicoverpa NPV EGT's that have an extremely high degree of nucleotide and amino acid sequence homology were used in this study. Single nucleotide polymorphisms (SNPs) within the gene were tabulated. The Helicoverpa NPV egts seem to be closely related to the egt genes of Mamestra configurata NPV (MacoNPV), Buzura suppressaria NPV (BusuSNPV) and Spodoptera exigua NPV (SeMNPV) with amino acid identities of approximately 50%. The Helicoverpa NPV EGTs show ten conserved motifs with other EGTs. A phylogenetic tree of 27 baculovirus EGTs and a human UDP-glucoronosyltransferase was constructed using Neighbour-joining within CLUSTAL X. That a secreted and active EGT is encoded by HaSNPV-SA was confirmed by assay of infected cell culture medium.
使用棉铃虫单粒包埋核多角体病毒(Hz-SNPV)基因特异性探针定位了一种单囊膜核多角体病毒的蜕皮甾体UDP-葡萄糖基转移酶(egt)基因。该SNPV是在南非西开普地区发现的,感染了棉铃虫群体(HaSNPV)。HaSNPV-SA egt的开放阅读框长1548个核苷酸,编码一个预测的516个氨基酸的蛋白质,分子量为58,897 kDa。5'-非编码区包含一个早期转录起始基序(CAGT)和一个杆状病毒晚期转录基序(ATAAG)。还鉴定出一个转录增强子序列(GATA)。还识别出两个可能的TATA框以及一个富含AT的区域。预测的EGT序列N端存在一个20个残基的假定信号肽。在翻译终止密码子下游发现了一个聚腺苷酸化信号(AATAAA)。本研究使用了五个核苷酸和氨基酸序列同源性极高的棉铃虫NPV EGT。列出了该基因内的单核苷酸多态性(SNP)。棉铃虫NPV egts似乎与甘蓝夜蛾NPV(MacoNPV)、桑毛虫NPV(BusuSNPV)和甜菜夜蛾NPV(SeMNPV)的egt基因密切相关,氨基酸同一性约为50%。棉铃虫NPV EGTs与其他EGTs显示出十个保守基序。使用CLUSTAL X中的邻接法构建了27种杆状病毒EGT和一种人UDP-葡萄糖醛酸基转移酶的系统发育树。通过对感染细胞培养基的检测证实,HaSNPV-SA编码一种分泌型且有活性的EGT。