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GDP对IMD2进行反馈调节所需的关键顺式作用元件是一个位于转录起始位点上游202个核苷酸处的TATA框。

The critical cis-acting element required for IMD2 feedback regulation by GDP is a TATA box located 202 nucleotides upstream of the transcription start site.

作者信息

Escobar-Henriques Mafalda, Daignan-Fornier Bertrand, Collart Martine A

机构信息

Institut de Biochimie et Génétique Cellulaires, CNRS UMR 5095, F-33077 Bordeaux Cedex, France.

出版信息

Mol Cell Biol. 2003 Sep;23(17):6267-78. doi: 10.1128/MCB.23.17.6267-6278.2003.

DOI:10.1128/MCB.23.17.6267-6278.2003
PMID:12917347
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC180940/
Abstract

Guanylic nucleotides are essential cellular players, and the critical enzyme in their tightly regulated synthesis in Saccharomyces cerevisiae is encoded by the IMD2 gene. The transcription of IMD2 is subject to general repression by nutrient limitation through the cis nutrient-sensing element. It is also subject to specific feedback regulation by the end products of the guanylic nucleotide synthesis pathway. The critical cis element for this latter mechanism is the guanine response element (GRE), a TATAATA sequence which is located 202 nucleotides upstream of the transcription initiation site and which functions as the IMD2 TATA box. We show that the GRE functions in conjunction with a 52-nucleotide stretch near the transcription start site. This very unusual promoter structure ensures low, basal expression of IMD2 and the recruitment of TFIID to the GRE in response to guanylic nucleotide limitation.

摘要

鸟苷酸是细胞必需的成分,在酿酒酵母中,其严格调控合成过程中的关键酶由IMD2基因编码。IMD2的转录通过顺式营养感应元件受到营养限制的总体抑制。它还受到鸟苷酸合成途径终产物的特异性反馈调节。后一种机制的关键顺式元件是鸟嘌呤反应元件(GRE),即位于转录起始位点上游202个核苷酸处的TATAATA序列,它作为IMD2的TATA框发挥作用。我们发现,GRE与转录起始位点附近一段52个核苷酸的序列协同发挥作用。这种非常特殊的启动子结构确保了IMD2的低水平基础表达,并在鸟苷酸受限的情况下将TFIID募集到GRE上。

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本文引用的文献

1
Transcription initiation of the yeast IMD2 gene is abolished in response to nutrient limitation through a sequence in its coding region.酵母IMD2基因的转录起始在营养限制条件下,通过其编码区中的一个序列被抑制。
Mol Cell Biol. 2003 Sep;23(17):6279-90. doi: 10.1128/MCB.23.17.6279-6290.2003.
2
The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions.Ccr4-Not复合物与yTAF1(yTaf(II)130p/yTaf(II)145p)表现出物理和功能上的相互作用。
Mol Cell Biol. 2002 Oct;22(19):6735-49. doi: 10.1128/MCB.22.19.6735-6749.2002.
3
Screening the yeast "disruptome" for mutants affecting resistance to the immunosuppressive drug, mycophenolic acid.筛选酵母“破坏基因组”以寻找影响对免疫抑制药物霉酚酸抗性的突变体。
J Biol Chem. 2002 Jul 26;277(30):27036-44. doi: 10.1074/jbc.M111433200. Epub 2002 May 16.
4
Proteome analysis and morphological studies reveal multiple effects of the immunosuppressive drug mycophenolic acid specifically resulting from guanylic nucleotide depletion.蛋白质组分析和形态学研究揭示了免疫抑制药物霉酚酸因鸟苷酸耗竭而产生的多种效应。
J Biol Chem. 2001 Dec 7;276(49):46237-42. doi: 10.1074/jbc.M103416200. Epub 2001 Sep 4.
5
Regulation of an IMP dehydrogenase gene and its overexpression in drug-sensitive transcription elongation mutants of yeast.酵母药物敏感型转录延伸突变体中肌苷一磷酸脱氢酶基因的调控及其过表达
J Biol Chem. 2001 Aug 31;276(35):32905-16. doi: 10.1074/jbc.M105075200. Epub 2001 Jul 5.
6
Genomic expression programs in the response of yeast cells to environmental changes.酵母细胞对环境变化响应中的基因组表达程序。
Mol Biol Cell. 2000 Dec;11(12):4241-57. doi: 10.1091/mbc.11.12.4241.
7
Transcriptional regulation of the yeast gmp synthesis pathway by its end products.酵母鸟苷酸合成途径受其终产物的转录调控。
J Biol Chem. 2001 Jan 12;276(2):1523-30. doi: 10.1074/jbc.M007926200.
8
The essential function of Not1 lies within the Ccr4-Not complex.Not1的基本功能存在于Ccr4-Not复合体中。
J Mol Biol. 2000 Oct 20;303(2):131-43. doi: 10.1006/jmbi.2000.4131.
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Saccharomyces cerevisiae transcription elongation mutants are defective in PUR5 induction in response to nucleotide depletion.酿酒酵母转录延伸突变体在响应核苷酸耗竭时PUR5诱导方面存在缺陷。
Mol Cell Biol. 2000 Oct;20(20):7427-37. doi: 10.1128/MCB.20.20.7427-7437.2000.
10
Mycophenolate mofetil and its mechanisms of action.霉酚酸酯及其作用机制。
Immunopharmacology. 2000 May;47(2-3):85-118. doi: 10.1016/s0162-3109(00)00188-0.