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豌豆幼苗与其他铜胺氧化酶(CAOs)之间还原半反应机制的比较。

A comparison of the mechanism for the reductive half-reaction between pea seedling and other copper amine oxidases (CAOs).

作者信息

Prabhakar Rajeev, Siegbahn Per E M

机构信息

Stockholm Centre for Physics, Astronomy and Biotechnology, Stockholm University, S-106 91 Stockholm, Sweden.

出版信息

J Comput Chem. 2003 Oct;24(13):1599-609. doi: 10.1002/jcc.10282.

Abstract

In a previous DFT study a mechanism for the reductive half-reaction of pea seedling amine oxidase (PSAO) was suggested. In many of the suggested steps a lysine at the active site plays an important role. However, this lysine is not found in other amine oxidases. The primary aim of the present DFT study is therefore to investigate alternative mechanisms for those amine oxidases (CAO) where the lysine residue is not present. One of the most important roles suggested for the lysine in PSAO was to protonate the O2-site of TPQ before the critical Cbond;H bond cleavage of the substrate. In the absence of lysine the O2-site of TPQ is now suggested to be protonated by a water ligand on the copper metal complex, in line with experimental suggestions. In other steps the role of lysine is taken over by an asparagine. All results are compared with experimental observations and good agreement is generally found.

摘要

在之前的一项密度泛函理论(DFT)研究中,有人提出了豌豆幼苗胺氧化酶(PSAO)还原半反应的一种机制。在许多提出的步骤中,活性位点的一个赖氨酸起着重要作用。然而,在其他胺氧化酶中未发现这种赖氨酸。因此,本DFT研究的主要目的是研究那些不存在赖氨酸残基的胺氧化酶(CAO)的替代机制。在PSAO中,赖氨酸被认为最重要的作用之一是在底物关键的C键;H键断裂之前使TPQ的O2位点质子化。在没有赖氨酸的情况下,现在认为TPQ的O2位点由铜金属络合物上的一个水配体质子化,这与实验建议一致。在其他步骤中,赖氨酸的作用由天冬酰胺取代。所有结果都与实验观察结果进行了比较,总体上发现吻合度良好。

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