Woo P C Y, Lau S K P, Fung A M Y, Chiu S K, Yung R W H, Yuen K Y
Department of Microbiology, The University of Hong Kong, University Pathology Building, Queen Mary Hospital Compound, Hong Kong.
J Clin Pathol. 2003 Sep;56(9):690-3. doi: 10.1136/jcp.56.9.690.
To define epidemiology, clinical disease, and outcome of gemella bacteraemia by 16S rRNA gene sequencing. To examine the usefulness of the Vitek, API, and ATB systems in identifying two gemella species.
All alpha haemolytic streptococci other than Streptococcus pneumoniae isolated from blood cultures during a six year period were identified by conventional biochemical methods, the Vitek system, and the API system. 16S rRNA gene sequencing was performed on all isolates identified by both kits as gemella with >or= 95% confidence or by either kit as any bacterial species with < 95% confidence. The ATB expression system was used to identify the two isolates that were defined as gemella species by 16S rRNA gene sequencing.
Of the 302 alpha haemolytic streptococci other than S pneumoniae isolated, one was identified as Gemella morbillorum, and another as Gemella haemolysans by 16S rRNA gene sequencing. The patient with monomicrobial G morbillorum bacteraemia was a 66 year old man with community acquired infective endocarditis with septic thromboemboli. The patient with G haemolysans bacteraemia was a 41 year old woman with hospital acquired polymicrobial bacteraemia during the neutropenic period of an autologous bone marrow transplant for non-Hodgkin's lymphoma, the first case of its kind in the English literature. The API and ATB expression systems only identified the second strain as G haemolysans at 94% and 99% confidence, respectively, whereas the Vitek system identified none of the two strains correctly at > 70% confidence.
Gemella bacteraemia is uncommon. 16S rRNA gene sequencing is the method of choice for identification of gemella and gemella-like isolates.
通过16S rRNA基因测序确定孪生球菌菌血症的流行病学、临床疾病及转归。检验Vitek、API和ATB系统在鉴定两种孪生球菌菌种方面的实用性。
采用传统生化方法、Vitek系统和API系统,对6年间从血培养中分离出的除肺炎链球菌外的所有α溶血性链球菌进行鉴定。对两种试剂盒均鉴定为孪生球菌且置信度≥95%或任一试剂盒鉴定为任一细菌菌种且置信度<95%的所有分离株进行16S rRNA基因测序。使用ATB表达系统鉴定经16S rRNA基因测序定义为孪生球菌菌种的两株分离株。
在分离出的302株除肺炎链球菌外的α溶血性链球菌中,经16S rRNA基因测序,一株鉴定为麻疹孪生球菌,另一株鉴定为溶血孪生球菌。患单一麻疹孪生球菌菌血症的患者为一名66岁男性,患有社区获得性感染性心内膜炎并伴有脓毒性血栓栓塞。患溶血孪生球菌菌血症的患者为一名41岁女性,在非霍奇金淋巴瘤自体骨髓移植的中性粒细胞减少期发生医院获得性多菌种菌血症,这是英文文献中首例此类病例。API和ATB表达系统分别仅以94%和99%的置信度将第二株鉴定为溶血孪生球菌,而Vitek系统在置信度>70%时未正确鉴定出这两株中的任何一株。
孪生球菌菌血症不常见。16S rRNA基因测序是鉴定孪生球菌及类似孪生球菌分离株的首选方法。