• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

核苷酸结合在脂质环境中诱导Sec A的寡聚状态和构象发生变化:小角中子散射研究。

Nucleotide binding induces changes in the oligomeric state and conformation of Sec A in a lipid environment: a small-angle neutron-scattering study.

作者信息

Bu Zimei, Wang Ligong, Kendall Debra A

机构信息

Department of Molecular and Cell Biology, University of Connecticut, 91 N. Eagleville Road, Storrs, CT 06269-3125, USA.

出版信息

J Mol Biol. 2003 Sep 5;332(1):23-30. doi: 10.1016/s0022-2836(03)00840-4.

DOI:10.1016/s0022-2836(03)00840-4
PMID:12946344
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3086338/
Abstract

In Escherichia coli, SecA is a large, multifunctional protein that is a vital component of the general protein secretion pathway. In its membrane-bound form it functions as the motor component of the protein translocase, perhaps through successive rounds of membrane insertion and ATP hydrolysis. To understand both the energy conversion process and translocase assembly, we have used contrast-matched, small-angle neutron-scattering (SANS) experiments to examine SecA in small unilamellar vesicles of E.coli phospholipids. In the absence of nucleotide, we observe a dimeric form of SecA with a radius of gyration comparable to that previously observed for SecA in solution. In contrast, the presence of either ADP or a non-hydrolyzable ATP analog induces conversion to a monomeric form. The larger radius of gyration for the ATP-bound relative to the ADP-bound form suggests the former has a more expanded global conformation. This is the first direct structural determination of SecA in a lipid bilayer. The SANS data indicate that nucleotide turnover can function as a switch of conformation of SecA in the membrane in a manner consistent with its proposed role in successive cycles of deep membrane penetration and release with concommitant preprotein insertion.

摘要

在大肠杆菌中,SecA是一种大型多功能蛋白,是一般蛋白质分泌途径的重要组成部分。以其膜结合形式,它作为蛋白质转位酶的动力组件发挥作用,可能是通过连续几轮的膜插入和ATP水解。为了理解能量转换过程和转位酶组装,我们使用对比匹配的小角中子散射(SANS)实验来研究大肠杆菌磷脂小单层囊泡中的SecA。在没有核苷酸的情况下,我们观察到SecA的二聚体形式,其回转半径与之前在溶液中观察到的SecA相当。相比之下,ADP或不可水解的ATP类似物的存在会诱导其转变为单体形式。与ADP结合形式相比,ATP结合形式的回转半径更大,这表明前者具有更扩展的整体构象。这是首次在脂质双层中对SecA进行直接结构测定。SANS数据表明,核苷酸周转可以作为SecA在膜中构象的开关,其方式与其在深度膜穿透和释放的连续循环中伴随前体蛋白插入的拟议作用一致。

相似文献

1
Nucleotide binding induces changes in the oligomeric state and conformation of Sec A in a lipid environment: a small-angle neutron-scattering study.核苷酸结合在脂质环境中诱导Sec A的寡聚状态和构象发生变化:小角中子散射研究。
J Mol Biol. 2003 Sep 5;332(1):23-30. doi: 10.1016/s0022-2836(03)00840-4.
2
Binding, activation and dissociation of the dimeric SecA ATPase at the dimeric SecYEG translocase.二聚体SecA ATP酶在二聚体SecYEG转运体上的结合、激活和解离。
EMBO J. 2003 Sep 1;22(17):4375-84. doi: 10.1093/emboj/cdg418.
3
Binding of SecA to the SecYEG complex accelerates the rate of nucleotide exchange on SecA.SecA与SecYEG复合体的结合加速了SecA上核苷酸交换的速率。
J Biol Chem. 2004 Apr 2;279(14):13769-77. doi: 10.1074/jbc.M312892200. Epub 2004 Jan 13.
4
Oligomeric states of the SecA and SecYEG core components of the bacterial Sec translocon.细菌Sec转运体SecA和SecYEG核心组分的寡聚状态。
Biochim Biophys Acta. 2007 Jan;1768(1):5-12. doi: 10.1016/j.bbamem.2006.08.013. Epub 2006 Aug 30.
5
Electron microscopic visualization of asymmetric precursor translocation intermediates: SecA functions as a dimer.电子显微镜可视化非对称前体易位中间体:SecA 作为二聚体发挥作用。
Sci China Life Sci. 2010 Sep;53(9):1049-56. doi: 10.1007/s11427-010-4061-x. Epub 2010 Nov 23.
6
Effects of signal peptide and adenylate on the oligomerization and membrane binding of soluble SecA.信号肽和腺苷酸对可溶性SecA寡聚化及膜结合的影响
J Biochem Mol Biol. 2006 May 31;39(3):319-28. doi: 10.5483/bmbrep.2006.39.3.319.
7
Escherichia coli SecA shape and dimensions.大肠杆菌SecA的形状和尺寸。
FEBS Lett. 1998 Oct 2;436(2):277-82. doi: 10.1016/s0014-5793(98)01141-7.
8
Quaternary structure of SecA in solution and bound to SecYEG probed at the single molecule level.在单分子水平上探测到溶液中和与 SecYEG 结合的 SecA 的四级结构。
Structure. 2011 Mar 9;19(3):430-9. doi: 10.1016/j.str.2010.12.016.
9
Nucleotide and phospholipid-dependent control of PPXD and C-domain association for SecA ATPase.SecA ATP酶的PPXD与C结构域结合的核苷酸和磷脂依赖性调控。
Biochemistry. 2003 Nov 25;42(46):13468-75. doi: 10.1021/bi035099b.
10
The high affinity ATP binding site modulates the SecA-precursor interaction.高亲和力ATP结合位点调节SecA与前体的相互作用。
FEBS Lett. 2000 Dec 1;486(1):57-62. doi: 10.1016/s0014-5793(00)02209-2.

引用本文的文献

1
Cardiolipin is required in vivo for the stability of bacterial translocon and optimal membrane protein translocation and insertion.心磷脂在体内对于细菌转位通道的稳定性和最佳膜蛋白易位和插入是必需的。
Sci Rep. 2020 Apr 14;10(1):6296. doi: 10.1038/s41598-020-63280-5.
2
SecA-Mediated Protein Translocation through the SecYEG Channel.SecA 介导的蛋白质通过 SecYEG 通道的易位。
Microbiol Spectr. 2019 Jul;7(4). doi: 10.1128/microbiolspec.PSIB-0028-2019.
3
Direct visualization of the Sec translocase engaging precursor proteins in lipid bilayers.

本文引用的文献

1
Crystal structure of Mycobacterium tuberculosis SecA, a preprotein translocating ATPase.结核分枝杆菌SecA的晶体结构,一种前体蛋白转运ATP酶。
Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2243-8. doi: 10.1073/pnas.0538077100. Epub 2003 Feb 26.
2
Phospholipid-induced monomerization and signal-peptide-induced oligomerization of SecA.磷脂诱导的SecA单体化以及信号肽诱导的SecA寡聚化。
J Biol Chem. 2003 Feb 7;278(6):3628-38. doi: 10.1074/jbc.M205992200. Epub 2002 Oct 27.
3
Nucleotide control of interdomain interactions in the conformational reaction cycle of SecA.
直接观察 Sec 转运蛋白在脂质双层中与前体蛋白结合。
Sci Adv. 2019 Jun 12;5(6):eaav9404. doi: 10.1126/sciadv.aav9404. eCollection 2019 Jun.
4
Solution Structure of an Intramembrane Aspartyl Protease via Small Angle Neutron Scattering.通过小角度中子散射解析跨膜天冬氨酸蛋白酶的结构。
Biophys J. 2018 Feb 6;114(3):602-608. doi: 10.1016/j.bpj.2017.12.017.
5
Biophysical approaches for the study of interactions between molecular chaperones and protein aggregates.用于研究分子伴侣与蛋白质聚集体之间相互作用的生物物理方法。
Chem Commun (Camb). 2015 Oct 4;51(77):14425-34. doi: 10.1039/c5cc03689e.
6
SecA: a potential antimicrobial target.SecA:一种潜在的抗菌靶点。
Future Med Chem. 2015;7(8):989-1007. doi: 10.4155/fmc.15.42.
7
In Vitro Interaction of the Housekeeping SecA1 with the Accessory SecA2 Protein of Mycobacterium tuberculosis.结核分枝杆菌管家蛋白SecA1与辅助蛋白SecA2的体外相互作用
PLoS One. 2015 Jun 5;10(6):e0128788. doi: 10.1371/journal.pone.0128788. eCollection 2015.
8
Analysis of SecA dimerization in solution.溶液中 SecA 二聚体的分析。
Biochemistry. 2014 May 20;53(19):3248-60. doi: 10.1021/bi500348p. Epub 2014 May 9.
9
Mapping of the SecA signal peptide binding site and dimeric interface by using the substituted cysteine accessibility method.利用取代半胱氨酸可及性方法绘制 SecA 信号肽结合位点和二聚体界面图。
J Bacteriol. 2013 Oct;195(20):4709-15. doi: 10.1128/JB.00661-13. Epub 2013 Aug 9.
10
Small angle neutron scattering for the study of solubilised membrane proteins.用于研究可溶性膜蛋白的小角中子散射
Eur Phys J E Soft Matter. 2013 Jul;36(7):71. doi: 10.1140/epje/i2013-13071-6. Epub 2013 Jul 16.
SecA构象反应循环中结构域间相互作用的核苷酸调控
Science. 2002 Sep 20;297(5589):2018-26. doi: 10.1126/science.1074424.
4
Dissociation of the dimeric SecA ATPase during protein translocation across the bacterial membrane.在蛋白质跨细菌膜转运过程中,二聚体SecA ATP酶的解离
EMBO J. 2002 Sep 2;21(17):4470-9. doi: 10.1093/emboj/cdf471.
5
Complex behavior in solution of homodimeric SecA.同型二聚体SecA溶液中的复杂行为。
Protein Sci. 2002 Apr;11(4):875-82. doi: 10.1110/ps.4090102.
6
The SecYEG preprotein translocation channel is a conformationally dynamic and dimeric structure.SecYEG前体蛋白易位通道是一种构象动态变化的二聚体结构。
EMBO J. 2002 Mar 1;21(5):995-1003. doi: 10.1093/emboj/21.5.995.
7
SecA folds via a dimeric intermediate.SecA通过二聚体中间体折叠。
Biochemistry. 2000 Sep 26;39(38):11667-76. doi: 10.1021/bi000299y.
8
A dynamic model for the allosteric mechanism of GroEL.GroEL变构机制的动态模型。
J Mol Biol. 2000 Sep 15;302(2):303-13. doi: 10.1006/jmbi.2000.4014.
9
Evaluating the oligomeric state of SecYEG in preprotein translocase.评估前体蛋白转运酶中SecYEG的寡聚状态。
EMBO J. 2000 Aug 15;19(16):4393-401. doi: 10.1093/emboj/19.16.4393.
10
Nucleotide binding activity of SecA homodimer is conformationally regulated by temperature and altered by prlD and azi mutations.SecA 同二聚体的核苷酸结合活性受温度的构象调节,并因 prlD 和 azi 突变而改变。
J Biol Chem. 2000 May 19;275(20):15440-8. doi: 10.1074/jbc.M000605200.