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1
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J Synchrotron Radiat. 2003 Mar 1;10(Pt 2):125-36. doi: 10.1107/s0909049502017739. Epub 2003 Feb 27.
2
Towards practical soft X-ray spectromicroscopy of biomaterials.迈向生物材料的实用软X射线光谱显微镜技术。
J Biomater Sci Polym Ed. 2002;13(8):919-37. doi: 10.1163/156856202320401960.
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A new bend-magnet beamline for scanning transmission X-ray microscopy at the Advanced Light Source.先进光源处用于扫描透射X射线显微镜的新型弯铁束线。
J Synchrotron Radiat. 2002 Jul 1;9(Pt 4):254-7. doi: 10.1107/s0909049502005502. Epub 2002 Jun 30.
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Extracellular DNA required for bacterial biofilm formation.细菌生物膜形成所需的细胞外DNA。
Science. 2002 Feb 22;295(5559):1487. doi: 10.1126/science.295.5559.1487.
5
Investigation of lotic microbial aggregates by a combined technique of fluorescent in situ hybridization and lectin-binding-analysis.通过荧光原位杂交和凝集素结合分析相结合的技术对流水微生物聚集体进行研究。
J Microbiol Methods. 2002 Mar;49(1):75-87. doi: 10.1016/s0167-7012(01)00354-2.
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A new sample preparation method for biological soft X-ray microscopy: nitrogen-based contrast and radiation tolerance properties of glycol methacrylate-embedded and sectioned tissue.一种用于生物软X射线显微镜的新型样品制备方法:甲基丙烯酸乙二醇酯包埋和切片组织的氮基对比度及辐射耐受性特性
J Microsc. 2001 Oct;204(Pt 1):69-86. doi: 10.1046/j.1365-2818.2001.00921.x.
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Soft x-ray spectroscopy from image sequences with sub-100 nm spatial resolution.具有亚100纳米空间分辨率的图像序列的软X射线光谱学。
J Microsc. 2000 Feb;197(Pt 2):173-84. doi: 10.1046/j.1365-2818.2000.00640.x.
8
The biofilm matrix--an immobilized but dynamic microbial environment.生物膜基质——一种固定但动态的微生物环境。
Trends Microbiol. 2001 May;9(5):222-7. doi: 10.1016/s0966-842x(01)02012-1.
9
Assessment of lectin-binding analysis for in situ detection of glycoconjugates in biofilm systems.凝集素结合分析用于生物膜系统中糖缀合物原位检测的评估。
Microbiology (Reading). 2001 Feb;147(Pt 2):299-313. doi: 10.1099/00221287-147-2-299.
10
A simple rotating annular reactor for replicated biofilm studies.一种用于重复生物膜研究的简单旋转环形反应器。
J Microbiol Methods. 2000 Nov;42(3):215-24. doi: 10.1016/s0167-7012(00)00195-0.

微生物生物膜胞外聚合物基质的扫描透射X射线、激光扫描和透射电子显微镜成像

Scanning transmission X-ray, laser scanning, and transmission electron microscopy mapping of the exopolymeric matrix of microbial biofilms.

作者信息

Lawrence J R, Swerhone G D W, Leppard G G, Araki T, Zhang X, West M M, Hitchcock A P

机构信息

National Water Research Institute, Saskatoon, Saskatchewan, Canada S7N 3H5.

出版信息

Appl Environ Microbiol. 2003 Sep;69(9):5543-54. doi: 10.1128/AEM.69.9.5543-5554.2003.

DOI:10.1128/AEM.69.9.5543-5554.2003
PMID:12957944
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC194976/
Abstract

Confocal laser scanning microscopy (CLSM), transmission electron microscopy (TEM), and soft X-ray scanning transmission X-ray microscopy (STXM) were used to map the distribution of macromolecular subcomponents (e.g., polysaccharides, proteins, lipids, and nucleic acids) of biofilm cells and matrix. The biofilms were developed from river water supplemented with methanol, and although they comprised a complex microbial community, the biofilms were dominated by heterotrophic bacteria. TEM provided the highest-resolution structural imaging, CLSM provided detailed compositional information when used in conjunction with molecular probes, and STXM provided compositional mapping of macromolecule distributions without the addition of probes. By examining exactly the same region of a sample with combinations of these techniques (STXM with CLSM and STXM with TEM), we demonstrate that this combination of multimicroscopy analysis can be used to create a detailed correlative map of biofilm structure and composition. We are using these correlative techniques to improve our understanding of the biochemical basis for biofilm organization and to assist studies intended to investigate and optimize biofilms for environmental remediation applications.

摘要

共聚焦激光扫描显微镜(CLSM)、透射电子显微镜(TEM)和软X射线扫描透射X射线显微镜(STXM)被用于绘制生物膜细胞和基质中大分子亚组分(如多糖、蛋白质、脂质和核酸)的分布。生物膜由添加了甲醇的河水形成,尽管它们包含复杂的微生物群落,但生物膜以异养细菌为主。TEM提供了最高分辨率的结构成像,CLSM与分子探针结合使用时提供了详细的成分信息,而STXM无需添加探针即可提供大分子分布的成分图谱。通过使用这些技术的组合(STXM与CLSM以及STXM与TEM)精确检查样品的同一区域,我们证明这种多显微镜分析组合可用于创建生物膜结构和组成的详细关联图谱。我们正在使用这些关联技术来增进我们对生物膜组织生化基础的理解,并协助旨在研究和优化用于环境修复应用的生物膜的研究。