Zengel Janice M, Jerauld Adam, Walker Andre, Wahl Markus C, Lindahl Lasse
Department of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250, USA.
RNA. 2003 Oct;9(10):1188-97. doi: 10.1261/rna.5400703.
Ribosomal proteins L4 and L22 both have a globular domain that sits on the surface of the large ribosomal subunit and an extended loop that penetrates its core. The tips of both loops contribute to the lining of the peptide exit tunnel and have been implicated in a gating mechanism that might regulate the exit of nascent peptides. Also, the extensions of L4 and L22 contact multiple domains of 23S rRNA, suggesting they might facilitate rRNA folding during ribosome assembly. To learn more about the roles of these extensions, we constructed derivatives of both proteins that lack most of their extended loops. Our analysis of ribosomes carrying L4 or L22 deletion proteins did not detect any significant difference in their sedimentation property or polysome distribution. Also, the role of L4 in autogenous control was not affected. We conclude that these extensions are not required for ribosome assembly or for L4-mediated autogenous control of the S10 operon.
核糖体蛋白L4和L22都有一个位于大核糖体亚基表面的球状结构域和一个深入其核心的延伸环。两个环的末端都参与了肽出口通道的内衬,并与一种可能调节新生肽出口的门控机制有关。此外,L4和L22的延伸部分与23S rRNA的多个结构域接触,表明它们可能在核糖体组装过程中促进rRNA折叠。为了更多地了解这些延伸部分的作用,我们构建了这两种蛋白质的衍生物,它们缺乏大部分延伸环。我们对携带L4或L22缺失蛋白的核糖体的分析没有检测到它们的沉降特性或多聚核糖体分布有任何显著差异。此外,L4在自身调控中的作用也没有受到影响。我们得出结论,这些延伸部分对于核糖体组装或L4介导的S10操纵子自身调控不是必需的。