• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

竞争性配体稳定了依赖TonB的外膜转运蛋白能量偶联基序的交替构象。

Competing ligands stabilize alternate conformations of the energy coupling motif of a TonB-dependent outer membrane transporter.

作者信息

Fanucci Gail E, Cadieux Nathalie, Kadner Robert J, Cafiso David S

机构信息

Department of Chemistry, University of Virginia, Charlottesville, VA 22904, USA.

出版信息

Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11382-7. doi: 10.1073/pnas.1932486100. Epub 2003 Sep 17.

DOI:10.1073/pnas.1932486100
PMID:13679579
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC208766/
Abstract

BtuB is a TonB-dependent outer-membrane transporter for vitamin B12 (or cyanocobalamin, CN-Cbl) in Escherichia coli. The binding of CN-Cbl is believed to promote an unfolding or undocking of the Ton box, the conserved N-terminal energy coupling motif at the periplasmic surface of the transporter. This structural change may facilitate the interaction of BtuB with the inner membrane protein TonB. In this work, the effect of the receptor binding fragment of colicin E3 (E3R) on the conformation of the Ton box was examined with site-directed spin labeling. Addition of E3R reverses the undocking of the Ton box that is promoted by CN-Cbl, consistent with a competitive binding between the substrate and the colicin fragment. EPR spectroscopy indicates that the Ton box is in a two-state equilibrium between docked and undocked conformations. In the absence of substrate, the docked conformation is the predominant state; however, the equilibrium can be shifted to the undocked state by the addition of detergents or site-specific proline substitutions. Even when the undocking is induced by detergents or by certain proline mutations, E3R binding shifts the equilibrium to the docked conformation. Thus, two competitive extracellular ligands, CN-Cbl and ER3, transduce opposite conformations of the N-terminal Ton box. Substrate binding stabilizes an undocked conformation, whereas E3R binding stabilizes a docked conformation of the Ton box.

摘要

BtuB是大肠杆菌中一种依赖TonB的维生素B12(或氰钴胺素,CN-Cbl)外膜转运蛋白。据信,CN-Cbl的结合会促进转运蛋白周质表面保守的N端能量偶联基序Ton盒的展开或脱离。这种结构变化可能有助于BtuB与内膜蛋白TonB相互作用。在这项工作中,通过定点自旋标记研究了大肠杆菌素E3的受体结合片段(E3R)对Ton盒构象的影响。加入E3R可逆转由CN-Cbl促进的Ton盒脱离,这与底物和大肠杆菌素片段之间的竞争性结合一致。电子顺磁共振光谱表明,Ton盒处于对接和未对接构象之间的双态平衡。在没有底物的情况下,对接构象是主要状态;然而,加入去污剂或位点特异性脯氨酸取代可使平衡向未对接状态移动。即使去污剂或某些脯氨酸突变诱导了未对接,E3R结合也会使平衡向对接构象移动。因此,两种竞争性细胞外配体CN-Cbl和ER3可转导N端Ton盒的相反构象。底物结合稳定未对接构象,而E3R结合稳定Ton盒的对接构象。

相似文献

1
Competing ligands stabilize alternate conformations of the energy coupling motif of a TonB-dependent outer membrane transporter.竞争性配体稳定了依赖TonB的外膜转运蛋白能量偶联基序的交替构象。
Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11382-7. doi: 10.1073/pnas.1932486100. Epub 2003 Sep 17.
2
Transport-defective mutations alter the conformation of the energy-coupling motif of an outer membrane transporter.转运缺陷型突变改变了外膜转运蛋白能量偶联基序的构象。
Biochemistry. 2001 Nov 20;40(46):13964-71. doi: 10.1021/bi015602p.
3
Substrate-induced conformational changes of the periplasmic N-terminus of an outer-membrane transporter by site-directed spin labeling.通过定点自旋标记研究外膜转运蛋白周质N端的底物诱导构象变化。
Biochemistry. 2003 Feb 18;42(6):1391-400. doi: 10.1021/bi027120z.
4
Sequence changes in the ton box region of BtuB affect its transport activities and interaction with TonB protein.BtuB的ton盒区域中的序列变化会影响其转运活性以及与TonB蛋白的相互作用。
J Bacteriol. 2000 Nov;182(21):5954-61. doi: 10.1128/JB.182.21.5954-5961.2000.
5
Differential substrate-induced signaling through the TonB-dependent transporter BtuB.通过依赖TonB的转运蛋白BtuB的不同底物诱导信号传导。
Proc Natl Acad Sci U S A. 2003 Sep 16;100(19):10688-93. doi: 10.1073/pnas.1932538100. Epub 2003 Sep 4.
6
A Dynamic Protein-Protein Coupling between the TonB-Dependent Transporter FhuA and TonB.铁转运蛋白FhuA与TonB之间的动态蛋白质-蛋白质偶联
Biochemistry. 2018 Feb 13;57(6):1045-1053. doi: 10.1021/acs.biochem.7b01223. Epub 2018 Jan 26.
7
Substrate-dependent unfolding of the energy coupling motif of a membrane transport protein determined by double electron-electron resonance.通过双电子-电子共振确定的膜转运蛋白能量偶联基序的底物依赖性去折叠
Biochemistry. 2006 Sep 12;45(36):10847-54. doi: 10.1021/bi061051x.
8
Ligand-induced structural changes in the Escherichia coli ferric citrate transporter reveal modes for regulating protein-protein interactions.配体诱导的大肠杆菌柠檬酸铁转运蛋白的结构变化揭示了调节蛋白-蛋白相互作用的方式。
J Mol Biol. 2012 Nov 9;423(5):818-30. doi: 10.1016/j.jmb.2012.09.003. Epub 2012 Sep 11.
9
Allosteric Signaling Is Bidirectional in an Outer-Membrane Transport Protein.变构信号在外膜转运蛋白中是双向的。
Biophys J. 2016 Nov 1;111(9):1908-1918. doi: 10.1016/j.bpj.2016.09.038.
10
Monomeric TonB and the Ton box are required for the formation of a high-affinity transporter-TonB complex.单体TonB 和 Ton 盒对于形成高亲和力转运体-TonB 复合物是必需的。
Biochemistry. 2013 Apr 16;52(15):2638-48. doi: 10.1021/bi3016108. Epub 2013 Apr 4.

引用本文的文献

1
Substrate Uptake by TonB-Dependent Outer Membrane Transporters.由TonB依赖性外膜转运蛋白介导的底物摄取
Mol Microbiol. 2024 Dec;122(6):929-947. doi: 10.1111/mmi.15332. Epub 2024 Dec 3.
2
Location, Location, Location: Establishing Design Principles for New Antibacterials from Ferric Siderophore Transport Systems.位置,位置,位置:从铁载体转运系统中建立新型抗菌药物的设计原则。
Molecules. 2024 Aug 16;29(16):3889. doi: 10.3390/molecules29163889.
3
HDX-MS performed on BtuB in outer membranes delineates the luminal domain's allostery and unfolding upon B12 and TonB binding.HDX-MS 在细菌外膜上的 BtuB 上进行,描绘了内腔域在结合 B12 和 TonB 时的变构和展开。
Proc Natl Acad Sci U S A. 2022 May 17;119(20):e2119436119. doi: 10.1073/pnas.2119436119. Epub 2022 May 12.
4
Vitamin B-peptide nucleic acids use the BtuB receptor to pass through the Escherichia coli outer membrane.维生素 B-肽核酸通过 BtuB 受体穿过大肠杆菌外膜。
Biophys J. 2021 Feb 16;120(4):725-737. doi: 10.1016/j.bpj.2021.01.004. Epub 2021 Jan 14.
5
Insights into SusCD-mediated glycan import by a prominent gut symbiont.洞悉重要肠道共生菌通过 SusCD 进行聚糖摄取的机制
Nat Commun. 2021 Jan 4;12(1):44. doi: 10.1038/s41467-020-20285-y.
6
Extracellular loops of BtuB facilitate transport of vitamin B12 through the outer membrane of E. coli.BtuB 的细胞外环有助于维生素 B12 通过大肠杆菌的外膜运输。
PLoS Comput Biol. 2020 Jul 1;16(7):e1008024. doi: 10.1371/journal.pcbi.1008024. eCollection 2020 Jul.
7
Structure and Stoichiometry of the Ton Molecular Motor.Ton 分子马达的结构与化学计量。
Int J Mol Sci. 2020 Jan 7;21(2):375. doi: 10.3390/ijms21020375.
8
The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.铜绿假单胞菌铁载体及其转运蛋白复合物提示双位点模型。
Nat Commun. 2019 Aug 14;10(1):3673. doi: 10.1038/s41467-019-11508-y.
9
Characterization of and lipopolysaccharide binding to the E. coli LptC protein dimer.大肠杆菌 LptC 蛋白二聚体的性质及其与脂多糖的结合。
Protein Sci. 2018 Feb;27(2):381-389. doi: 10.1002/pro.3322. Epub 2017 Oct 28.
10
Gating of TonB-dependent transporters by substrate-specific forced remodelling.底物特异性强制重塑调控 TonB 依赖型转运蛋白的门控作用。
Nat Commun. 2017 Apr 21;8:14804. doi: 10.1038/ncomms14804.

本文引用的文献

1
Differential substrate-induced signaling through the TonB-dependent transporter BtuB.通过依赖TonB的转运蛋白BtuB的不同底物诱导信号传导。
Proc Natl Acad Sci U S A. 2003 Sep 16;100(19):10688-93. doi: 10.1073/pnas.1932538100. Epub 2003 Sep 4.
2
OmpF enhances the ability of BtuB to protect susceptible Escherichia coli cells from colicin E9 cytotoxicity.
FEBS Lett. 2003 Jun 19;545(2-3):127-32. doi: 10.1016/s0014-5793(03)00511-8.
3
Concerted folding and binding of a flexible colicin domain to its periplasmic receptor TolA.一种柔性大肠杆菌素结构域与其周质受体TolA的协同折叠与结合。
J Biol Chem. 2003 Jun 13;278(24):21860-8. doi: 10.1074/jbc.M300411200. Epub 2003 Apr 4.
4
Substrate-induced transmembrane signaling in the cobalamin transporter BtuB.钴胺素转运蛋白BtuB中的底物诱导跨膜信号传导。
Nat Struct Biol. 2003 May;10(5):394-401. doi: 10.1038/nsb914.
5
Crystallization and initial X-ray diffraction of BtuB, the integral membrane cobalamin transporter of Escherichia coli.
Acta Crystallogr D Biol Crystallogr. 2003 Mar;59(Pt 3):509-11. doi: 10.1107/s0907444903000052. Epub 2003 Feb 21.
6
Substrate-induced conformational changes of the periplasmic N-terminus of an outer-membrane transporter by site-directed spin labeling.通过定点自旋标记研究外膜转运蛋白周质N端的底物诱导构象变化。
Biochemistry. 2003 Feb 18;42(6):1391-400. doi: 10.1021/bi027120z.
7
On the interaction of colicin E3 with the ribosome.关于大肠杆菌素E3与核糖体的相互作用。
Biochimie. 2002 May-Jun;84(5-6):447-54. doi: 10.1016/s0300-9084(02)01449-9.
8
Mechanisms of colicin binding and transport through outer membrane porins.大肠杆菌素通过外膜孔蛋白的结合与转运机制。
Biochimie. 2002 May-Jun;84(5-6):399-412. doi: 10.1016/s0300-9084(02)01455-4.
9
The Tol proteins of Escherichia coli and their involvement in the translocation of group A colicins.大肠杆菌的Tol蛋白及其在A群大肠杆菌素转运中的作用。
Biochimie. 2002 May-Jun;84(5-6):391-7. doi: 10.1016/s0300-9084(02)01419-0.
10
Killing of E coli cells by E group nuclease colicins.E 族核酸酶大肠杆菌素对大肠杆菌细胞的杀伤作用。
Biochimie. 2002 May-Jun;84(5-6):381-9. doi: 10.1016/s0300-9084(02)01450-5.