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铁转运蛋白FhuA与TonB之间的动态蛋白质-蛋白质偶联

A Dynamic Protein-Protein Coupling between the TonB-Dependent Transporter FhuA and TonB.

作者信息

Sarver Jessica L, Zhang Michael, Liu Lishan, Nyenhuis David, Cafiso David S

机构信息

Department of Chemistry and Center for Membrane Biology, University of Virginia , McCormick Road, Charlottesville, Virginia 22904, United States.

出版信息

Biochemistry. 2018 Feb 13;57(6):1045-1053. doi: 10.1021/acs.biochem.7b01223. Epub 2018 Jan 26.

Abstract

Bacterial outer membrane TonB-dependent transporters function by executing cycles of binding and unbinding to the inner membrane protein TonB. In the vitamin B transporter BtuB and the ferric citrate transporter FecA, substrate binding increases the periplasmic exposure of the Ton box, an energy-coupling segment. This increased exposure appears to enhance the affinity of the transporter for TonB. Here, continuous wave and pulse EPR spectroscopy were used to examine the state of the Ton box in the Escherichia coli ferrichrome transporter FhuA. In its apo state, the Ton box of FhuA samples a broad range of positions and multiple conformational substates. When bound to ferrichrome, the Ton box does not extend further into the periplasm, although the structural states sampled by the FhuA Ton box are altered. When bound to a soluble fragment of TonB, the TonB-FhuA complex remains heterogeneous and dynamic, indicating that TonB does not make strong, specific contacts with either the FhuA barrel or the core region of the transporter. This result differs from that seen in the crystal structure of the TonB-FhuA complex. These data indicate that unlike BtuB and FecA, the periplasmic exposure of the Ton box in FhuA does not change significantly in the presence of substrate and that allosteric control of transporter-TonB interactions functions by a different mechanism than that seen in either BtuB or FecA. Moreover, the data indicate that models involving a rotation of TonB relative to the transporter are unlikely to underlie the mechanism that drives TonB-dependent transport.

摘要

细菌外膜中依赖TonB的转运蛋白通过与内膜蛋白TonB进行结合和解离循环来发挥作用。在维生素B转运蛋白BtuB和柠檬酸铁转运蛋白FecA中,底物结合增加了能量偶联区段Ton框在周质中的暴露。这种增加的暴露似乎增强了转运蛋白对TonB的亲和力。在此,利用连续波和脉冲电子顺磁共振光谱来研究大肠杆菌铁载体转运蛋白FhuA中Ton框的状态。在其空载状态下,FhuA的Ton框处于广泛的位置范围和多种构象亚状态。当与铁载体结合时,Ton框不会进一步延伸到周质中,尽管FhuA的Ton框所采样的结构状态发生了改变。当与TonB的可溶性片段结合时,TonB-FhuA复合物仍然是异质且动态的,这表明TonB与FhuA桶状结构或转运蛋白的核心区域没有形成强烈的特异性接触。这一结果与TonB-FhuA复合物的晶体结构不同。这些数据表明,与BtuB和FecA不同,在存在底物的情况下,FhuA中Ton框在周质中的暴露没有显著变化,并且转运蛋白-TonB相互作用的变构控制通过与BtuB或FecA中所见不同的机制起作用。此外,数据表明,涉及TonB相对于转运蛋白旋转的模型不太可能是驱动依赖TonB运输的机制基础。

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本文引用的文献

1
Gating of TonB-dependent transporters by substrate-specific forced remodelling.
Nat Commun. 2017 Apr 21;8:14804. doi: 10.1038/ncomms14804.
2
Going Outside the TonB Box: Identification of Novel FepA-TonB Interactions .
J Bacteriol. 2017 Apr 25;199(10). doi: 10.1128/JB.00649-16. Print 2017 May 15.
3
Allosteric Signaling Is Bidirectional in an Outer-Membrane Transport Protein.
Biophys J. 2016 Nov 1;111(9):1908-1918. doi: 10.1016/j.bpj.2016.09.038.
4
ROSET Model of TonB Action in Gram-Negative Bacterial Iron Acquisition.
J Bacteriol. 2016 Jan 19;198(7):1013-21. doi: 10.1128/JB.00823-15.
5
Energy-dependent motion of TonB in the Gram-negative bacterial inner membrane.
Proc Natl Acad Sci U S A. 2013 Jul 9;110(28):11553-8. doi: 10.1073/pnas.1304243110. Epub 2013 Jun 24.
6
Monomeric TonB and the Ton box are required for the formation of a high-affinity transporter-TonB complex.
Biochemistry. 2013 Apr 16;52(15):2638-48. doi: 10.1021/bi3016108. Epub 2013 Apr 4.
8
DEER distance measurements on proteins.
Annu Rev Phys Chem. 2012;63:419-46. doi: 10.1146/annurev-physchem-032511-143716. Epub 2012 Jan 30.
9
TonB or not TonB: is that the question?
Biochem Cell Biol. 2011 Apr;89(2):87-97. doi: 10.1139/o10-141.
10
Conformational analysis of a nitroxide side chain in an α-helix with density functional theory.
J Phys Chem B. 2011 Jan 20;115(2):397-405. doi: 10.1021/jp108871m. Epub 2010 Dec 17.

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