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海洋形成星形聚集体的细菌:新种大西洋土壤杆菌;新种流星土壤杆菌;新种铁锈色土壤杆菌,名称修订;新种明胶土壤杆菌,名称修订;以及新种星状土壤杆菌,名称修订

Marine star-shaped-aggregate-forming bacteria: Agrobacterium atlanticum sp. nov.; Agrobacterium meteori sp. nov.; Agrobacterium ferrugineum sp. nov., nom. rev.; Agrobacterium gelatinovorum sp. nov., nom. rev.; and Agrobacterium stellulatum sp. nov., nom. rev.

作者信息

Rüger H J, Höfle M G

机构信息

Alfred-Wegener-Institut für Polar- und Meeresforschung, Bremerhaven, Germany.

出版信息

Int J Syst Bacteriol. 1992 Jan;42(1):133-43. doi: 10.1099/00207713-42-1-133.

DOI:10.1099/00207713-42-1-133
PMID:1371058
Abstract

Two new species of aerobic, gram-negative, peritrichously flagellated or nonmotile marine bacteria usually forming star-shaped aggregates were isolated from northeastern Atlantic Ocean bottom sediments. These organisms resembled eight star-shaped-aggregate-forming bacterial species from the Baltic Sea originally ascribed to the genus Agrobacterium but not included on the Approved Lists of Bacterial Names because of their questionable relationships to true agrobacteria. These two sets of star-shaped-aggregate-forming bacteria were compared by means of phenotypic data, DNA base compositions, DNA-DNA relatedness, and one-dimensional electrophoretic analysis of low-molecular-weight RNAs (5S rRNA and tRNA). According to the results of genotyping, the northeastern Atlantic Ocean isolates and three of the Baltic Sea species formed a group of closely related bacteria that could not be excluded from the genus Agrobacterium with certainty. Until more genotypic data are available, these five marine species are regarded as a distinct subdivision of the genus Agrobacterium consisting of Agrobacterium atlanticum sp. nov. (type strain, 1480T = DSM 5823T), A. meteori sp. nov. (type strain, 1513T = DSM 5824T), A. ferrugineum sp. nov. nom. rev. emend. (type strain, ATCC 25652T), A. gelatinovorum sp. nov. nom. rev. emend. (type strain, ATCC 25655T), and A. stellulatum sp. nov. nom. rev. emend. (type strain, ATCC 15215T). "A. aggregatum" proved to be a later subjective synonym of A. stellulatum, which had priority. The remaining four Baltic Sea species, "A. agile," "A. kieliense," "A. luteum," and "A. sanguineum," could not be placed in the new subdivision of Agrobacterium.

摘要

从东北大西洋海底沉积物中分离出两种需氧、革兰氏阴性、周生鞭毛或不运动的海洋细菌新物种,它们通常形成星形聚集体。这些微生物类似于最初归属于土壤杆菌属的来自波罗的海的8种形成星形聚集体的细菌物种,但由于它们与真正的土壤杆菌的关系存疑,未被列入《细菌名称核准名录》。通过表型数据、DNA碱基组成、DNA-DNA相关性以及低分子量RNA(5S rRNA和tRNA)的一维电泳分析,对这两组形成星形聚集体的细菌进行了比较。根据基因分型结果,东北大西洋分离株和波罗的海的3个物种形成了一组密切相关的细菌,不能确定将它们排除在土壤杆菌属之外。在获得更多基因分型数据之前,这5个海洋物种被视为土壤杆菌属的一个独特亚群,包括大西洋土壤杆菌新种(模式菌株,1480T = DSM 5823T)、流星土壤杆菌新种(模式菌株,1513T = DSM 5824T)、铁锈色土壤杆菌新种(名称修订并修正,模式菌株,ATCC 25652T)、明胶土壤杆菌新种(名称修订并修正,模式菌株,ATCC 25655T)和星状土壤杆菌新种(名称修订并修正,模式菌株,ATCC 15215T)。“聚集土壤杆菌”被证明是具有优先权的星状土壤杆菌的后选主观同物异名。其余4个波罗的海物种,“敏捷土壤杆菌”、“基尔土壤杆菌”、“黄色土壤杆菌”和“血色土壤杆菌”,不能归入土壤杆菌属的新亚群。

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