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基于随机扩增多态性DNA和限制性片段长度多态性构建的灰盖鬼伞担子菌连锁图谱。

A linkage map of the basidiomycete Coprinus cinereus based on random amplified polymorphic DNAs and restriction fragment length polymorphisms.

作者信息

Muraguchi Hajime, Ito Yasuhiro, Kamada Takashi, Yanagi Sonoe O

机构信息

Department of Biotechnology, Faculty of Bioresource Sciences, Akita Prefectural University, Akita 010-0195, Japan.

出版信息

Fungal Genet Biol. 2003 Nov;40(2):93-102. doi: 10.1016/s1087-1845(03)00087-2.

Abstract

A genetic linkage map of the basidiomycete Coprinus cinereus was constructed on the basis of the segregation of 219 RAPD markers, 28 RFLP markers and the A and B mating-type loci among 40 random basidiospore progeny from a single cross between a wild-type homokaryon, KF(3)#2, and an AmutBmut strain, #326. Thirteen linkage groups covering a total of 1346cM were identified and correlated to the 13 chromosomes of this fungus by hybridization of RFLP and RAPD marker probes to CHEF blots. These probes also revealed chromosome length polymorphisms (CLP), which could be associated with haplotype plots of the progeny. The average kb/cM ratio in this cross was approximately 27.9kb/cM. The AmutBmut strain undergoes sexual development without mating, because of mutations in both A and B mating-type loci, and has been used to identify mutations affecting developmental processes such as dikaryosis, fruit body morphogenesis, and meiosis. The markers in the map, especially the RAPD ones, would facilitate mapping of genes responsible for such mutations induced in the AmutBmut strain.

摘要

基于219个随机扩增多态性DNA(RAPD)标记、28个限制性片段长度多态性(RFLP)标记以及A和B交配型位点在来自野生型同核体KF(3)#2与AmutBmut菌株#326单次杂交产生的40个随机担孢子后代中的分离情况,构建了灰盖鬼伞担子菌的遗传连锁图谱。通过将RFLP和RAPD标记探针与钳位均匀电场(CHEF)印迹杂交,鉴定出13个连锁群,共覆盖1346厘摩(cM),并与该真菌的13条染色体相关联。这些探针还揭示了染色体长度多态性(CLP),其可能与后代的单倍型图谱相关。此杂交中的平均每厘摩千碱基(kb/cM)比率约为27.9kb/cM。由于A和B交配型位点均发生突变,AmutBmut菌株无需交配即可进行有性发育,并且已被用于鉴定影响双核化、子实体形态发生和减数分裂等发育过程的突变。图谱中的标记,尤其是RAPD标记,将有助于对AmutBmut菌株中诱导产生的此类突变相关基因进行定位。

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