Saarela Jani, Oinonen Carita, Jalanko Anu, Rouvinen Juha, Peltonen Leena
Department of Medical Genetics and National Public Health Institute, University of Helsinki, Haartmaninkatu 8, FIN-00290 Helsinki, Finland.
Biochem J. 2004 Mar 1;378(Pt 2):363-71. doi: 10.1042/BJ20031496.
Aspartylglucosaminidase (AGA) belongs to the N-terminal nucleophile (Ntn) hydrolase superfamily characterized by an N-terminal nucleophile as the catalytic residue. Three-dimensional structures of the Ntn hydrolases reveal a common folding pattern and equivalent stereochemistry at the active site. The activation of the precursor polypeptide occurs autocatalytically, and for some amidohydrolases of prokaryotes, the precursor structure is known and activation mechanisms are suggested. In humans, the deficient AGA activity results in a lysosomal storage disease, aspartylglucosaminuria (AGU) resulting in progressive neurodegeneration. Most of the disease-causing mutations lead to defective molecular maturation of AGA, and, to understand the structure-function relationship better, in the present study, we have analysed the effects of targeted amino acid substitutions on the activation process of human AGA. We have evaluated the effect of the previously published mutations and, in addition, nine novel mutations were generated. We could identify one novel amino acid, Gly258, with an important structural role on the autocatalytic activation of human AGA, and present the molecular mechanism for the autoproteolytic activation of the eukaryotic enzyme. Based on the results of the present study, and by comparing the available information on the activation of the Ntn-hydrolases, the autocatalytic processes of the prokaryotic and eukaryotic enzymes share common features. First, the critical nucleophile functions both as the catalytic and autocatalytic residue; secondly, the side chain of this nucleophile is oriented towards the scissile peptide bond; thirdly, conformational strain exists in the precursor at the cleavage site; finally, water molecules are utilized in the activation process.
天冬氨酰葡糖胺酶(AGA)属于N-末端亲核体(Ntn)水解酶超家族,其特征是以N-末端亲核体作为催化残基。Ntn水解酶的三维结构揭示了一种常见的折叠模式以及活性位点处等效的立体化学。前体多肽的激活是自动催化发生的,对于一些原核生物的酰胺水解酶,其前体结构是已知的,并且提出了激活机制。在人类中,AGA活性缺乏导致溶酶体贮积病——天冬氨酰葡糖胺尿症(AGU),进而导致进行性神经变性。大多数致病突变导致AGA分子成熟缺陷,为了更好地理解结构-功能关系,在本研究中,我们分析了靶向氨基酸取代对人AGA激活过程的影响。我们评估了先前发表的突变的影响,此外,还产生了9个新的突变。我们能够鉴定出一个对人AGA自动催化激活具有重要结构作用的新氨基酸Gly258,并提出了真核酶自蛋白水解激活的分子机制。基于本研究的结果,并通过比较关于Ntn水解酶激活的现有信息,原核和真核酶的自动催化过程具有共同特征。首先,关键亲核体同时作为催化和自动催化残基起作用;其次,该亲核体的侧链朝向可裂解肽键;第三,前体在切割位点存在构象应变;最后,水分子在激活过程中被利用。