Dekker Carien, de Kruijff Ben, Gros Piet
National Institute for Medical Research, The Ridgeway, Mill Hill, London, England, NW7 1AA, UK.
J Struct Biol. 2003 Dec;144(3):313-9. doi: 10.1016/j.jsb.2003.09.012.
The chaperone SecB from Escherichia coli is primarily involved in passing precursor proteins into the Sec system via specific interactions with SecA. The crystal structure of SecB from E. coli has been solved to 2.35 A resolution. The structure shows flexibility in the crossover loop and the helix-connecting loop, regions that have been implicated to be part of the SecB substrate-binding site. Moreover conformational variability of Trp36 is observed as well as different loop conformations for the different monomers. Based on this, we speculate that SecB can regulate the access or extent of its hydrophobic substrate-binding site, by modulating the conformation of the crossover loop and the helix-connecting loop. The structure also clearly explains why the tetrameric equilibrium is shifted towards the dimeric state in the mutant SecBCys76Tyr. The buried cysteine residue is crucial for tight packing, and mutations are likely to disrupt the tetramer formation but not the dimer formation.
来自大肠杆菌的伴侣蛋白SecB主要通过与SecA的特异性相互作用,将前体蛋白传递到Sec系统中。已解析出大肠杆菌SecB的晶体结构,分辨率达到2.35 Å。该结构显示,在交叉环和螺旋连接环中存在灵活性,这些区域被认为是SecB底物结合位点的一部分。此外,还观察到色氨酸36的构象变异性以及不同单体的不同环构象。基于此,我们推测SecB可以通过调节交叉环和螺旋连接环的构象,来调节其疏水底物结合位点的可及性或范围。该结构还清楚地解释了为什么在突变体SecBCys76Tyr中,四聚体平衡会向二聚体状态转变。埋藏的半胱氨酸残基对于紧密堆积至关重要,突变可能会破坏四聚体的形成,但不会破坏二聚体的形成。