Suppr超能文献

睡美人转座的特性及其在小鼠基因筛选中的应用。

Characterization of Sleeping Beauty transposition and its application to genetic screening in mice.

作者信息

Horie Kyoji, Yusa Kosuke, Yae Kojiro, Odajima Junko, Fischer Sylvia E J, Keng Vincent W, Hayakawa Tomoko, Mizuno Sumi, Kondoh Gen, Ijiri Takashi, Matsuda Yoichi, Plasterk Ronald H A, Takeda Junji

机构信息

Collaborative Research Center for Advanced Science and Technology, Department of Social and Environmental Medicine, Graduate School of Medicine, Osaka University, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.

出版信息

Mol Cell Biol. 2003 Dec;23(24):9189-207. doi: 10.1128/MCB.23.24.9189-9207.2003.

Abstract

The use of mutant mice plays a pivotal role in determining the function of genes, and the recently reported germ line transposition of the Sleeping Beauty (SB) transposon would provide a novel system to facilitate this approach. In this study, we characterized SB transposition in the mouse germ line and assessed its potential for generating mutant mice. Transposition sites not only were clustered within 3 Mb near the donor site but also were widely distributed outside this cluster, indicating that the SB transposon can be utilized for both region-specific and genome-wide mutagenesis. The complexity of transposition sites in the germ line was high enough for large-scale generation of mutant mice. Based on these initial results, we conducted germ line mutagenesis by using a gene trap scheme, and the use of a green fluorescent protein reporter made it possible to select for mutant mice rapidly and noninvasively. Interestingly, mice with mutations in the same gene, each with a different insertion site, were obtained by local transposition events, demonstrating the feasibility of the SB transposon system for region-specific mutagenesis. Our results indicate that the SB transposon system has unique features that complement other mutagenesis approaches.

摘要

突变小鼠的使用在确定基因功能方面起着关键作用,最近报道的睡美人(SB)转座子的种系转座将提供一个新的系统来促进这种方法。在本研究中,我们对小鼠种系中的SB转座进行了表征,并评估了其产生突变小鼠的潜力。转座位点不仅聚集在供体位点附近的3 Mb范围内,而且在该簇之外广泛分布,这表明SB转座子可用于区域特异性诱变和全基因组诱变。种系中转座位点的复杂性足以大规模产生突变小鼠。基于这些初步结果,我们使用基因捕获方案进行种系诱变,并且使用绿色荧光蛋白报告基因使得能够快速、非侵入性地选择突变小鼠。有趣的是,通过局部转座事件获得了同一基因发生突变但插入位点不同的小鼠,证明了SB转座子系统用于区域特异性诱变的可行性。我们的结果表明,SB转座子系统具有独特的特征,可补充其他诱变方法。

相似文献

1
Characterization of Sleeping Beauty transposition and its application to genetic screening in mice.
Mol Cell Biol. 2003 Dec;23(24):9189-207. doi: 10.1128/MCB.23.24.9189-9207.2003.
3
Efficient chromosomal transposition of a Tc1/mariner- like transposon Sleeping Beauty in mice.
Proc Natl Acad Sci U S A. 2001 Jul 31;98(16):9191-6. doi: 10.1073/pnas.161071798.
4
Transposon mutagenesis of the mouse germline.
Genetics. 2003 Sep;165(1):243-56. doi: 10.1093/genetics/165.1.243.
5
Chromosomal transposition of PiggyBac in mouse embryonic stem cells.
Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9290-5. doi: 10.1073/pnas.0801017105. Epub 2008 Jun 25.
6
Insertional mutagenesis of the mouse germline with Sleeping Beauty transposition.
Methods Mol Biol. 2008;435:109-25. doi: 10.1007/978-1-59745-232-8_8.
7
Enhancement of Sleeping Beauty transposition by CpG methylation: possible role of heterochromatin formation.
Mol Cell Biol. 2004 May;24(9):4004-18. doi: 10.1128/MCB.24.9.4004-4018.2004.
8
Transposon mutagenesis in mice.
Methods Mol Biol. 2009;530:379-90. doi: 10.1007/978-1-59745-471-1_20.
9
Sleeping beauty transposon-mediated poly(A)-trapping and insertion mutagenesis in mouse embryonic stem cells.
Environ Mol Mutagen. 2018 Oct;59(8):687-697. doi: 10.1002/em.22234. Epub 2018 Oct 2.

引用本文的文献

1
Engineering structural variants to interrogate genome function.
Nat Genet. 2024 Dec;56(12):2623-2635. doi: 10.1038/s41588-024-01981-7. Epub 2024 Nov 12.
2
Advances in transposable elements: from mechanisms to applications in mammalian genomics.
Front Genet. 2023 Nov 30;14:1290146. doi: 10.3389/fgene.2023.1290146. eCollection 2023.
3
From parasites to partners: exploring the intricacies of host-transposon dynamics and coevolution.
Funct Integr Genomics. 2023 Aug 23;23(3):278. doi: 10.1007/s10142-023-01206-w.
4
Novel insights into the genetic landscape of congenital heart disease with systems genetics.
Prog Pediatr Cardiol. 2019 Sep;54. doi: 10.1016/j.ppedcard.2019.101128. Epub 2019 Jul 10.
5
Advances in Genome Editing and Application to the Generation of Genetically Modified Rat Models.
Front Genet. 2021 Apr 20;12:615491. doi: 10.3389/fgene.2021.615491. eCollection 2021.
7
Jumping Ahead with : Mechanistic Insights into Cut-and-Paste Transposition.
Viruses. 2021 Jan 8;13(1):76. doi: 10.3390/v13010076.
9
Efficient genome-wide first-generation phenotypic screening system in mice using the transposon.
Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18507-18516. doi: 10.1073/pnas.1906354116. Epub 2019 Aug 26.
10
Sleeping Beauty Transposon-Mediated Asparaginase Gene Delivery by a Nanoparticle Platform.
Sci Rep. 2019 Aug 7;9(1):11457. doi: 10.1038/s41598-019-47927-6.

本文引用的文献

1
Alpha-neurexins couple Ca2+ channels to synaptic vesicle exocytosis.
Nature. 2003 Jun 26;423(6943):939-48. doi: 10.1038/nature01755.
2
Antisense transcripts with FANTOM2 clone set and their implications for gene regulation.
Genome Res. 2003 Jun;13(6B):1324-34. doi: 10.1101/gr.982903.
3
The DNA-bending protein HMGB1 is a cellular cofactor of Sleeping Beauty transposition.
Nucleic Acids Res. 2003 May 1;31(9):2313-22. doi: 10.1093/nar/gkg341.
4
Initial sequencing and comparative analysis of the mouse genome.
Nature. 2002 Dec 5;420(6915):520-62. doi: 10.1038/nature01262.
5
Mining the mouse genome.
Nature. 2002 Dec 5;420(6915):512-4. doi: 10.1038/420512a.
6
Antisense RNA in imprinting: spreading silence through Air.
Trends Genet. 2002 Sep;18(9):434-7. doi: 10.1016/s0168-9525(02)02749-x.
8
Crystal structure of Arp2/3 complex.
Science. 2001 Nov 23;294(5547):1679-84. doi: 10.1126/science.1066333.
9
Efficient chromosomal transposition of a Tc1/mariner- like transposon Sleeping Beauty in mice.
Proc Natl Acad Sci U S A. 2001 Jul 31;98(16):9191-6. doi: 10.1073/pnas.161071798.
10
Transposition and gene disruption in the male germline of the mouse.
Genesis. 2001 Jun;30(2):82-8. doi: 10.1002/gene.1037.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验