Department of Genetics, Boyer Center for Molecular Medicine, Yale University School of Medicine, New Haven, CT 06536.
Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06536.
Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18507-18516. doi: 10.1073/pnas.1906354116. Epub 2019 Aug 26.
Genome-wide phenotypic screens provide an unbiased way to identify genes involved in particular biological traits, and have been widely used in lower model organisms. However, cost and time have limited the utility of such screens to address biological and disease questions in mammals. Here we report a highly efficient () transposon-based first-generation (F1) dominant screening system in mice that enables an individual investigator to conduct a genome-wide phenotypic screen within a year with fewer than 300 cages. The screening system uses visually trackable transposons to induce both gain- and loss-of-function mutations and generates genome-wide distributed new insertions in more than 55% of F1 progeny. Using this system, we successfully conducted a pilot F1 screen and identified 5 growth retardation mutations. One of these mutants, a Six1/4 mutant, revealed a role in milk intake behavior. The mutant animals exhibit abnormalities in nipple recognition and milk ingestion, as well as developmental defects in cranial nerves V, IX, and X. This F1 screening system offers individual laboratories unprecedented opportunities to conduct affordable genome-wide phenotypic screens for deciphering the genetic basis of mammalian biology and disease pathogenesis.
全基因组表型筛选为鉴定特定生物特征相关基因提供了一种无偏的方法,已广泛应用于低等模式生物。然而,成本和时间限制了此类筛选在解决哺乳动物生物学和疾病问题方面的应用。在这里,我们报告了一种在小鼠中高效的基于转座子的第一代(F1)显性筛选系统,该系统使单个研究人员能够在一年内使用少于 300 个笼子进行全基因组表型筛选。该筛选系统使用可视觉追踪的转座子诱导功能获得和功能丧失突变,并在超过 55%的 F1 后代中产生全基因组分布的新插入。使用该系统,我们成功地进行了第一代筛选试验,并鉴定出 5 种生长迟缓突变。其中一个突变体是 Six1/4 突变体,揭示了其在牛奶摄入行为中的作用。突变动物在乳头识别和牛奶摄入方面表现出异常,以及颅神经 V、IX 和 X 的发育缺陷。这种 F1 筛选系统为单个实验室提供了前所未有的机会,进行经济实惠的全基因组表型筛选,以破译哺乳动物生物学和疾病发病机制的遗传基础。