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成簇的嗅觉受体基因家族262:基因组组织、启动子元件及相互作用的转录因子

The clustered olfactory receptor gene family 262: genomic organization, promotor elements, and interacting transcription factors.

作者信息

Hoppe Reiner, Frank Henning, Breer Heinz, Strotmann Jörg

机构信息

Institute of Physiology, University of Hohenheim, 70593 Stuttgart, Germany.

出版信息

Genome Res. 2003 Dec;13(12):2674-85. doi: 10.1101/gr.1372203.

Abstract

For six mouse olfactory receptor genes from family 262 which are expressed in clustered populations of olfactory sensory neurons, the genomic as well as cDNA structures were deciphered. All genes contained several exons which in some cases were alternatively spliced. Immediately upstream of the transcription start sites, sequence motif blocks were identified that are highly conserved among olfactory receptor (OR) genes which are expressed in clustered neuronal populations. By means of electrophoretic mobility shift assays, it was demonstrated that segments of the motif block region interact with proteins extracted from nuclear fractions of the olfactory epithelium. Yeast one-hybrid screenings of an olfactory cDNA library led to the identification of a set of transcription factors that specifically bind to particular elements of the motif block region. The identified factors can be categorized into two types: One group is known to be involved in transcriptional initiation, and the second group represents factors involved in pattern formations. The identified components may contribute to govern the precise topographic expression pattern of olfactory receptor genes.

摘要

对于在嗅觉感觉神经元的聚集群体中表达的来自262家族的六个小鼠嗅觉受体基因,其基因组以及cDNA结构已被解析。所有基因都包含几个外显子,在某些情况下这些外显子会发生可变剪接。在转录起始位点的紧邻上游,鉴定出了序列基序模块,这些模块在聚集神经元群体中表达的嗅觉受体(OR)基因中高度保守。通过电泳迁移率变动分析表明,基序模块区域的片段与从嗅觉上皮细胞核提取物中提取的蛋白质相互作用。对嗅觉cDNA文库进行酵母单杂交筛选,从而鉴定出一组与基序模块区域的特定元件特异性结合的转录因子。鉴定出的因子可分为两类:一类已知参与转录起始,另一类代表参与模式形成的因子。鉴定出的这些成分可能有助于控制嗅觉受体基因精确的拓扑表达模式。

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