• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酿酒酵母中端粒位置效应表观遗传的DNA聚合酶ε与ISW2/yCHRAC的非竞争性拮抗作用

Noncompetitive counteractions of DNA polymerase epsilon and ISW2/yCHRAC for epigenetic inheritance of telomere position effect in Saccharomyces cerevisiae.

作者信息

Iida Tetsushi, Araki Hiroyuki

机构信息

Division of Microbial Genetics, National Institute of Genetics, SOKENDAI, Mishima, Shizuoka 411-8540, Japan.

出版信息

Mol Cell Biol. 2004 Jan;24(1):217-27. doi: 10.1128/MCB.24.1.217-227.2004.

DOI:10.1128/MCB.24.1.217-227.2004
PMID:14673157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC303358/
Abstract

Relocation of euchromatic genes near the heterochromatin region often results in mosaic gene silencing. In Saccharomyces cerevisiae, cells with the genes inserted at telomeric heterochromatin-like regions show a phenotypic variegation known as the telomere-position effect, and the epigenetic states are stably passed on to following generations. Here we show that the epigenetic states of the telomere gene are not stably inherited in cells either bearing a mutation in a catalytic subunit (Pol2) of replicative DNA polymerase epsilon (Pol epsilon) or lacking one of the nonessential and histone fold motif-containing subunits of Pol epsilon, Dpb3 and Dpb4. We also report a novel and putative chromatin-remodeling complex, ISW2/yCHRAC, that contains Isw2, Itc1, Dpb3-like subunit (Dls1), and Dpb4. Using the single-cell method developed in this study, we demonstrate that without Pol epsilon and ISW2/yCHRAC, the epigenetic states of the telomere are frequently switched. Furthermore, we reveal that Pol epsilon and ISW2/yCHRAC function independently: Pol epsilon operates for the stable inheritance of a silent state, while ISW2/yCHRAC works for that of an expressed state. We therefore propose that inheritance of specific epigenetic states of a telomere requires at least two counteracting regulators.

摘要

常染色质基因重定位到异染色质区域附近通常会导致嵌合基因沉默。在酿酒酵母中,基因插入端粒异染色质样区域的细胞表现出一种称为端粒位置效应的表型变异,并且这种表观遗传状态会稳定地传递给后代。在这里,我们表明,在复制性DNA聚合酶ε(Pol ε)的催化亚基(Pol2)发生突变的细胞中,或者在缺乏Pol ε的非必需且含组蛋白折叠基序的亚基之一Dpb3和Dpb4的细胞中,端粒基因的表观遗传状态不会稳定遗传。我们还报告了一种新型的假定染色质重塑复合体ISW2/yCHRAC,它包含Isw2、Itc1、Dpb3样亚基(Dls1)和Dpb4。使用本研究中开发的单细胞方法,我们证明,没有Pol ε和ISW2/yCHRAC,端粒的表观遗传状态会频繁切换。此外,我们揭示Pol ε和ISW2/yCHRAC独立发挥作用:Pol ε负责沉默状态的稳定遗传,而ISW2/yCHRAC负责表达状态的稳定遗传。因此,我们提出端粒特定表观遗传状态的遗传至少需要两种相互拮抗的调节因子。

相似文献

1
Noncompetitive counteractions of DNA polymerase epsilon and ISW2/yCHRAC for epigenetic inheritance of telomere position effect in Saccharomyces cerevisiae.酿酒酵母中端粒位置效应表观遗传的DNA聚合酶ε与ISW2/yCHRAC的非竞争性拮抗作用
Mol Cell Biol. 2004 Jan;24(1):217-27. doi: 10.1128/MCB.24.1.217-227.2004.
2
Dpb4 promotes resection of DNA double-strand breaks and checkpoint activation by acting in two different protein complexes.Dpb4 通过在两个不同的蛋白质复合物中发挥作用,促进 DNA 双链断裂的切除和检验点的激活。
Nat Commun. 2021 Aug 6;12(1):4750. doi: 10.1038/s41467-021-25090-9.
3
The Dpb4 subunit of ISW2 is anchored to extranucleosomal DNA.ISW2的Dpb4亚基锚定在外核小体DNA上。
J Biol Chem. 2007 Jul 6;282(27):19418-25. doi: 10.1074/jbc.M700640200. Epub 2007 May 9.
4
Mismatch repair-independent increase in spontaneous mutagenesis in yeast lacking non-essential subunits of DNA polymerase ε.缺乏非必需 DNA 聚合酶 ε 亚基的酵母中,错配修复非依赖性自发突变增加。
PLoS Genet. 2010 Nov 18;6(11):e1001209. doi: 10.1371/journal.pgen.1001209.
5
Coordinated regulation of heterochromatin inheritance by Dpb3-Dpb4 complex.Dpb3-Dpb4 复合物协调异染色质遗传的调控。
Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12524-12529. doi: 10.1073/pnas.1712961114. Epub 2017 Nov 6.
6
Histone fold protein Dls1p is required for Isw2-dependent chromatin remodeling in vivo.组蛋白折叠蛋白Dls1p在体内Isw2依赖性染色质重塑过程中是必需的。
Mol Cell Biol. 2004 Apr;24(7):2605-13. doi: 10.1128/MCB.24.7.2605-2613.2004.
7
Isw2 regulates gene silencing at the ribosomal DNA locus in Saccharomyces cerevisiae.Isw2在酿酒酵母的核糖体DNA位点调控基因沉默。
Biochem Biophys Res Commun. 2007 Oct 5;361(4):1017-21. doi: 10.1016/j.bbrc.2007.07.140. Epub 2007 Aug 2.
8
Identification and cloning of two histone fold motif-containing subunits of HeLa DNA polymerase epsilon.人宫颈癌HeLa细胞DNA聚合酶ε两个含组蛋白折叠基序亚基的鉴定与克隆
J Biol Chem. 2000 Jul 28;275(30):23247-52. doi: 10.1074/jbc.M002548200.
9
Structure of the polymerase ε holoenzyme and atomic model of the leading strand replisome.聚合酶 ε 全酶的结构和前导链复制体的原子模型。
Nat Commun. 2020 Jun 22;11(1):3156. doi: 10.1038/s41467-020-16910-5.
10
Double-stranded DNA binding, an unusual property of DNA polymerase epsilon, promotes epigenetic silencing in Saccharomyces cerevisiae.双链DNA结合是DNA聚合酶ε的一种特殊性质,它能促进酿酒酵母中的表观遗传沉默。
J Biol Chem. 2006 Oct 27;281(43):32898-908. doi: 10.1074/jbc.M606637200. Epub 2006 Aug 16.

引用本文的文献

1
The WAC-downWAC domain in the yeast ISW2 nucleosome remodeling complex forms a structural module essential for ISW2 function but not cell viability.酵母ISW2核小体重塑复合物中的WAC-downWAC结构域形成了一个对ISW2功能至关重要但对细胞活力并非必需的结构模块。
Epigenetics Chromatin. 2025 May 21;18(1):30. doi: 10.1186/s13072-025-00593-7.
2
Increased levels of lagging strand polymerase α in an adult stem cell lineage affect replication-coupled histone incorporation.成体干细胞谱系中滞后链聚合酶α水平升高会影响复制偶联组蛋白的掺入。
Sci Adv. 2025 Feb 28;11(9):eadu6799. doi: 10.1126/sciadv.adu6799.
3
Reversible stochastic epigenetic like silencing of the production of pulcherriminic acid in the antimicrobial antagonist Metschnikowia Pulcherrima.在抗菌拮抗真菌美丽毛壳菌中, pulcherriminic 酸的产生可逆的随机表观遗传样沉默。
Sci Rep. 2024 Nov 29;14(1):29677. doi: 10.1038/s41598-024-80436-9.
4
The loss of DNA polymerase epsilon accessory subunits POLE3-POLE4 leads to BRCA1-independent PARP inhibitor sensitivity.DNA 聚合酶 ε 辅助亚基 POLE3-POLE4 的缺失导致了不依赖 BRCA1 的 PARP 抑制剂敏感性。
Nucleic Acids Res. 2024 Jul 8;52(12):6994-7011. doi: 10.1093/nar/gkae439.
5
Reduced Levels of Lagging Strand Polymerases Shape Stem Cell Chromatin.滞后链聚合酶水平降低塑造干细胞染色质。
bioRxiv. 2024 Apr 29:2024.04.26.591383. doi: 10.1101/2024.04.26.591383.
6
Heterochromatin in plant meiosis.植物减数分裂中的异染色质。
Nucleus. 2024 Dec;15(1):2328719. doi: 10.1080/19491034.2024.2328719. Epub 2024 Mar 15.
7
Symmetric inheritance of parental histones governs epigenome maintenance and embryonic stem cell identity.双亲组蛋白的对称遗传控制着表观基因组的维持和胚胎干细胞的身份。
Nat Genet. 2023 Sep;55(9):1567-1578. doi: 10.1038/s41588-023-01476-x. Epub 2023 Sep 4.
8
Conservation and Expansion of Transcriptional Factor Repertoire in the Species Complex.物种复合体中转录因子库的保守与扩展
J Fungi (Basel). 2023 Mar 15;9(3):359. doi: 10.3390/jof9030359.
9
Conservation and Expansion of Transcriptional Factor Repertoire in the Species Complex.物种复合体中转录因子库的保守与扩展
bioRxiv. 2023 Feb 10:2023.02.09.527873. doi: 10.1101/2023.02.09.527873.
10
The Dynamics of Adaptation to Stress from Standing Genetic Variation and de novo Mutations.适应源于站立遗传变异和新生突变的压力的动态变化。
Mol Biol Evol. 2022 Nov 3;39(11). doi: 10.1093/molbev/msac242.

本文引用的文献

1
GINS, a novel multiprotein complex required for chromosomal DNA replication in budding yeast.GINS是一种在芽殖酵母中进行染色体DNA复制所需的新型多蛋白复合物。
Genes Dev. 2003 May 1;17(9):1153-65. doi: 10.1101/gad.1065903.
2
Cell-type-dependent repression of yeast a-specific genes requires Itc1p, a subunit of the Isw2p-Itc1p chromatin remodelling complex.酵母a特异性基因的细胞类型依赖性抑制需要Isw2p-Itc1p染色质重塑复合物的一个亚基Itc1p。
Microbiology (Reading). 2003 Feb;149(Pt 2):341-351. doi: 10.1099/mic.0.25920-0.
3
Cell-cycle control of the establishment of mating-type silencing in S. cerevisiae.酿酒酵母中交配型沉默建立的细胞周期调控。
Genes Dev. 2002 Nov 15;16(22):2935-45. doi: 10.1101/gad.764102.
4
An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin.一种ACF1-ISWI染色质重塑复合物是通过异染色质进行DNA复制所必需的。
Nat Genet. 2002 Dec;32(4):627-32. doi: 10.1038/ng1046. Epub 2002 Nov 18.
5
High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2.由ISW2重塑的核小体中组蛋白-DNA相互作用变化的高分辨率图谱。
Mol Cell Biol. 2002 Nov;22(21):7524-34. doi: 10.1128/MCB.22.21.7524-7534.2002.
6
Disruptor of telomeric silencing-1 is a chromatin-specific histone H3 methyltransferase.端粒沉默破坏因子-1是一种染色质特异性组蛋白H3甲基转移酶。
J Biol Chem. 2002 Aug 23;277(34):30421-4. doi: 10.1074/jbc.C200366200. Epub 2002 Jul 3.
7
Dot1p modulates silencing in yeast by methylation of the nucleosome core.Dot1p通过核小体核心的甲基化作用调控酵母中的基因沉默。
Cell. 2002 Jun 14;109(6):745-56. doi: 10.1016/s0092-8674(02)00759-6.
8
Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association.Dot1介导的组蛋白H3球状结构域内的赖氨酸甲基化对于端粒沉默和Sir蛋白结合很重要。
Genes Dev. 2002 Jun 15;16(12):1518-27. doi: 10.1101/gad.1001502.
9
The DNA polymerase domain of pol(epsilon) is required for rapid, efficient, and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae.在酿酒酵母中,聚合酶ε的DNA聚合酶结构域对于快速、高效且高度精确的染色体DNA复制、端粒长度维持以及正常细胞衰老来说是必需的。
J Biol Chem. 2002 Aug 2;277(31):28099-108. doi: 10.1074/jbc.M111573200. Epub 2002 May 15.
10
Human DNA polymerase epsilon colocalizes with proliferating cell nuclear antigen and DNA replication late, but not early, in S phase.人类DNA聚合酶ε在S期晚期而非早期与增殖细胞核抗原共定位,并参与DNA复制。
J Biol Chem. 2002 Mar 8;277(10):8658-66. doi: 10.1074/jbc.M110615200. Epub 2001 Dec 10.