Warscheid Bettina, Fenselau Catherine
Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, USA.
Anal Chem. 2003 Oct 15;75(20):5618-27. doi: 10.1021/ac034200f.
A strategy is proposed for the rapid identification of Bacillus spores, which relies on the selective release of a family of proteins, referred to as small, acid-soluble spore proteins (SASPs). In this work, SASPs were selectively solubilized from Bacillus spores on the MALDI sample plate by using 10% TFA. Proteolytic digests of SASPs generated in situ from spores of B. subtilis 168, B. globigii, B. thuringiensis subs. Kurstaki HD-1, B. cereus T, and the nonpathogenic strain B. anthracis Sterne were prepared in 5-25 min by using trypsin immobilized on Agarose beads and subsequently analyzed by MALDI-TOFMS using a curved-field reflectron. Protein identification was obtained by partial sequencing of distinctive tryptic peptides from Bacillus spores via post-source decay analysis combined with genome-based database searches by Mascot Sequence Query. Various unique SASPs were identified, allowing the characterization of Bacillus species by obtaining sequence-specific information on single peptides. The applicability of this approach for the rapid identification of Bacillus species was further established by analyzing spore mixtures.
本文提出了一种快速鉴定芽孢杆菌孢子的策略,该策略依赖于一类被称为小的、酸溶性孢子蛋白(SASP)的蛋白质的选择性释放。在这项工作中,通过使用10%的三氟乙酸(TFA),在基质辅助激光解吸电离(MALDI)样品板上从芽孢杆菌孢子中选择性地溶解SASP。使用固定在琼脂糖珠上的胰蛋白酶,在5 - 25分钟内制备了来自枯草芽孢杆菌168、球形芽孢杆菌、苏云金芽孢杆菌亚种库尔斯塔克HD - 1、蜡状芽孢杆菌T以及非致病性炭疽芽孢杆菌斯特恩菌株孢子原位产生的SASP的蛋白水解消化物,随后使用弯曲场反射器通过MALDI - TOFMS进行分析。通过对芽孢杆菌孢子独特的胰蛋白酶肽段进行部分测序,并结合通过Mascot序列查询基于基因组的数据库搜索来获得蛋白质鉴定。鉴定出了各种独特的SASP,通过获取单个肽段的序列特异性信息来对芽孢杆菌物种进行表征。通过分析孢子混合物进一步确立了该方法在快速鉴定芽孢杆菌物种方面的适用性。