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哮喘与解聚素金属蛋白酶33(ADAM33)中的单核苷酸多态性有关。

Asthma is associated with single-nucleotide polymorphisms in ADAM33.

作者信息

Werner M, Herbon N, Gohlke H, Altmüller J, Knapp M, Heinrich J, Wjst M

机构信息

Institute of Epidemiology, GSF National Research Center for Environment and Health, Ingolstaedter Landstrasse, Neuherberg, Germany.

出版信息

Clin Exp Allergy. 2004 Jan;34(1):26-31. doi: 10.1111/j.1365-2222.2004.01846.x.

Abstract

BACKGROUND

The ADAM33 gene has recently been associated with asthma and bronchial hyper-reactivity. It codes for a disintegrin and metalloproteinase that triggers intra- and extracellular signalling by protein shedding.

OBJECTIVE

We examined whether polymorphisms in ADAM33 are associated with asthma and related traits in two German populations.

METHODS

We genotyped 15 intragenic single-nucleotide polymorphisms (SNPs) by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of allele-specific primer extension products. The transmission disequilibrium test was used for association analysis in the German asthma family study. Additionally, we tested for association of these SNPs in a case-control sample from the European Community Respiratory Health Study using Armitage's trend test.

RESULTS

In both studies, we found SNPs that were significantly associated with asthma and related traits. In the family study, significant associations were observed for the SNPs F+1, ST+4 and ST+5 (with the lowest P-value for F+1, P=0.005). Remarkably, this association is seen even in the absence of linkage with two microsatellite markers from a previous genome scan either 3.1 million bases (Mb) up- or 5.6 Mb downstream. In the case-control study, SNP ST+7 (P=0.008) was significantly associated with asthma. Some of these SNPs overlapped with those found to be associated with elevated total IgE levels and bronchial hyper-responsiveness.

CONCLUSION

This study replicates the recently published association between asthma and ADAM33 gene variants. However, most of the associated SNPs were at non-identical positions in the German, UK and US samples. As linkage disequilibrium is high among the tested SNPs, and there is no known functional polymorphism, either not-tested variants in ADAM33, unknown regulatory elements or a gene in close proximity is responsible for this association.

摘要

背景

ADAM33基因最近被认为与哮喘和支气管高反应性有关。它编码一种解整合素和金属蛋白酶,通过蛋白水解引发细胞内和细胞外信号传导。

目的

我们研究了ADAM33基因多态性是否与两个德国人群中的哮喘及相关特征有关。

方法

我们通过等位基因特异性引物延伸产物的基质辅助激光解吸/电离飞行时间质谱法对15个基因内单核苷酸多态性(SNP)进行基因分型。在德国哮喘家系研究中,采用传递不平衡检验进行关联分析。此外,我们在欧洲共同体呼吸健康研究的病例对照样本中,使用阿米蒂奇趋势检验对这些SNP进行关联测试。

结果

在两项研究中,我们均发现了与哮喘及相关特征显著相关的SNP。在家系研究中,观察到SNP F+1、ST+4和ST+5存在显著关联(F+1的P值最低,P = 0.005)。值得注意的是,即使在与先前全基因组扫描中的两个微卫星标记无连锁关系的情况下,这种关联依然存在,这两个微卫星标记分别位于其上游310万个碱基(Mb)处或下游560万个碱基处。在病例对照研究中,SNP ST+7(P = 0.008)与哮喘显著相关。其中一些SNP与那些被发现与总IgE水平升高和支气管高反应性相关的SNP重叠。

结论

本研究重复了最近发表的哮喘与ADAM33基因变异之间的关联。然而,在德国、英国和美国样本中,大多数相关SNP位于不同位置。由于所测试的SNP之间连锁不平衡程度较高,且不存在已知的功能多态性,因此ADAM33中未测试的变异、未知的调控元件或附近的基因可能是导致这种关联的原因。

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