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嗜冷杆菌属Ant300菌株的冷活性酯酶:基因克隆、特性分析以及活性位点附近甘氨酸向脯氨酸的取代对其催化活性和稳定性的影响

Cold-active esterase from Psychrobacter sp. Ant300: gene cloning, characterization, and the effects of Gly-->Pro substitution near the active site on its catalytic activity and stability.

作者信息

Kulakova Ljudmila, Galkin Andrey, Nakayama Toru, Nishino Tokuzo, Esaki Nobuyoshi

机构信息

Laboratory of Microbial Biochemistry, Institute for Chemical Research, Kyoto University, Uji, Kyoto-Fu, Kyoto 611-0011, Japan.

出版信息

Biochim Biophys Acta. 2004 Jan 14;1696(1):59-65. doi: 10.1016/j.bbapap.2003.09.008.

DOI:10.1016/j.bbapap.2003.09.008
PMID:14726205
Abstract

The gene encoding an esterase (PsyEst) of Psychrobacter sp. Ant300, a psychrophilic bacterium isolated from Antarctic soil, was cloned, sequenced, and expressed in Escherichia coli. PsyEst, which is a member of hormone-sensitive lipase (HSL) group of the lipase/esterase family, is a cold-active, themolabile enzyme with high catalytic activity at low temperatures (5-25 degrees C), low activation energy (e.g., 4.6 kcal/mol for hydrolysis of p-nitrophenyl butyrate), and a t(1/2) value of 16 min for thermal inactivation during incubation at 40 degrees C and pH 7.9. A three-dimensional structural model of PsyEst predicted that Gly(244) was located in the loop near the active site of PsyEst and that substitution of this amino-acid residue by proline should potentially rigidify the active-site environment of the enzyme. Thus, we introduced the Gly(244)-->Pro substitution into the enzyme. Stability studies showed that the t(1/2) value for thermal inactivation of the mutant during incubation at 40 degrees C and pH 7.9 was 11.6 h, which was significantly greater than that of the wild-type enzyme. The k(cat)/K(m) value of the mutant was lower for all substrates examined than the value of the wild type. Moreover, this amino-acid substitution caused a shift of the acyl-chain length specificity of the enzyme toward higher preference for short-chain fatty acid esters. All of these observations could be explained in terms of a decrease in active-site flexibility brought about by the mutation and were consistent with the hypothesis that cold activity and thermolability arise from local flexibility around the active site of the enzyme.

摘要

从南极土壤中分离出的嗜冷细菌嗜冷栖热菌(Psychrobacter sp.)Ant300编码酯酶(PsyEst)的基因被克隆、测序并在大肠杆菌中表达。PsyEst是脂肪酶/酯酶家族中激素敏感脂肪酶(HSL)组的成员,是一种冷活性、热不稳定的酶,在低温(5-25摄氏度)下具有高催化活性,低活化能(例如,对硝基苯丁酸水解的活化能为4.6千卡/摩尔),在40摄氏度和pH 7.9孵育期间热失活的t(1/2)值为16分钟。PsyEst的三维结构模型预测,Gly(244)位于PsyEst活性位点附近的环中,用脯氨酸取代该氨基酸残基可能会使酶的活性位点环境刚性化。因此,我们将Gly(244)替换为Pro引入到该酶中。稳定性研究表明,在40摄氏度和pH 7.9孵育期间,突变体热失活的t(1/2)值为11.6小时,这明显大于野生型酶。对于所有检测的底物,突变体的k(cat)/K(m)值均低于野生型。此外,这种氨基酸取代导致酶的酰基链长度特异性发生变化,使其对短链脂肪酸酯的偏好性更高。所有这些观察结果都可以用突变导致的活性位点灵活性降低来解释,并且与冷活性和热不稳定源于酶活性位点周围局部灵活性的假设一致。

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