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通过定点突变对弗氏普罗威登斯菌谷氨酰胺合成酶的性质进行表征和改良。

Characterization and improved properties of Glutamine synthetase from Providencia vermicola by site-directed mutagenesis.

机构信息

College of Life Science and Technology, State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, P.R. China.

Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, 173234, Himachal Pradesh, India.

出版信息

Sci Rep. 2018 Oct 23;8(1):15640. doi: 10.1038/s41598-018-34022-5.

Abstract

In this study, a novel gene for Glutamine synthetase was cloned and characterized for its activities and stabilities from a marine bacterium Providencia vermicola (PveGS). A mutant S54A was generated by site directed mutagenesis, which showed significant increase in the activity and stabilities at a wide range of temperatures. The K values of PveGS against hydroxylamine, ADP-Na and L-Glutamine were 15.7 ± 1.1, (25.2 ± 1.5) × 10 and 32.6 ± 1.7 mM, and the k were 17.0 ± 0.6, 9.14 ± 0.12 and 30.5 ± 1.0 s respectively. In-silico-analysis revealed that the replacement of Ser at 54th position with Ala increased the catalytic activity of PveGS. Therefore, catalytic efficiency of mutant S54A had increased by 3.1, 0.89 and 2.9-folds towards hydroxylamine, ADP-Na and L-Glutamine respectively as compared to wild type. The structure prediction data indicated that the negatively charged pocket becomes enlarged and hydrogen bonding in Ser54 steadily promotes the product release. Interestingly, the residual activity of S54A mutant was increased by 10.7, 3.8 and 3.8 folds at 0, 10 and 50 °C as compared to WT. Structural analysis showed that S54A located on the loop near to the active site improved its flexibility due to the breaking of hydrogen bonds between product and enzyme. This also facilitated the enzyme to increase its cold adaptability as indicated by higher residual activity shown at 0 °C. Thus, replacement of Ala to Ser54 played a pivotal role to enhance the activities and stabilities at a wide range of temperatures.

摘要

在这项研究中,从海洋细菌 Providencia vermicola(PveGS)中克隆并表征了一种新的谷氨酰胺合成酶基因,以研究其活性和稳定性。通过定点突变生成了一个突变体 S54A,该突变体在很宽的温度范围内表现出显著的活性和稳定性增加。PveGS 对羟胺、ADP-Na 和 L-谷氨酰胺的 K 值分别为 15.7±1.1、(25.2±1.5)×10 和 32.6±1.7 mM,k 值分别为 17.0±0.6、9.14±0.12 和 30.5±1.0 s。计算机分析表明,第 54 位丝氨酸被丙氨酸取代增加了 PveGS 的催化活性。因此,与野生型相比,突变体 S54A 对羟胺、ADP-Na 和 L-谷氨酰胺的催化效率分别提高了 3.1、0.89 和 2.9 倍。结构预测数据表明,带负电荷的口袋变大,丝氨酸 54 位的氢键稳定促进了产物的释放。有趣的是,与 WT 相比,S54A 突变体在 0、10 和 50°C 时的剩余活性分别提高了 10.7、3.8 和 3.8 倍。结构分析表明,S54A 位于靠近活性位点的环上,由于产物与酶之间氢键的断裂,其柔性得到提高。这也使得酶能够提高其低温适应性,如在 0°C 时表现出更高的剩余活性所示。因此,丝氨酸 54 位被丙氨酸取代对提高酶在很宽温度范围内的活性和稳定性起着关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0317/6199252/082122cc742b/41598_2018_34022_Fig1_HTML.jpg

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