Travillian Ravensara S, Rosse Cornelius, Shapiro Linda G
University of Washington, Seattle, WA 98195, USA.
AMIA Annu Symp Proc. 2003;2003:669-73.
The increasing need for extrapolating information from one species to another has been highlighted by contemporary research in bioinformatics, genomics, proteomics, and animal models of human disease, as well as other fields. We propose an approach to correlating the anatomy of Homo sapiens with selected species, using the Foundational Model of Anatomy (FMA) as a framework, and graph matching as a method, for determining similarities and differences in the nodes and relationships (edges) defined by the attributed graph of the FMA. We illustrate our approach by comparing anatomical structures of mouse and human that present prototypical mapping problems.
当代生物信息学、基因组学、蛋白质组学、人类疾病动物模型以及其他领域的研究凸显了从一个物种推断另一物种信息的需求日益增加。我们提出一种方法,以解剖学基础模型(FMA)为框架,利用图匹配作为手段,将智人的解剖结构与选定物种进行关联,从而确定FMA属性图所定义的节点和关系(边)中的异同。我们通过比较呈现典型映射问题的小鼠和人类的解剖结构来说明我们的方法。