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流式细胞术数据中细胞亚群的可视化呈现。

Visual representation of cell subpopulation from flow cytometry data.

作者信息

Kim Eun Young, Zeng Qing T, Kuo Frank C, Rawn James, Mentzer Steven J

机构信息

Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.

出版信息

AMIA Annu Symp Proc. 2003;2003:893.

Abstract

Flow cytometric systems are useful for protein identification and expression analysis, especially characterizing particular lineage or sublineage of cells. We clustered flow cytometry data of bone marrow cells into subpopulations using a clustering algorithm with its physical characteristics (cell size and cell granularity) and different molecular composition (cell reactivity with monoclonal antibodies). To display the cell subpopulations, we created a colored map according to the mean of 5 flow cytometry parameters based on a cluster. Such a map can reveal subpopulation properties that are not evident in the widely used scatter plot.

摘要

流式细胞术系统对于蛋白质鉴定和表达分析很有用,尤其适用于表征特定细胞谱系或亚谱系。我们使用一种聚类算法,根据骨髓细胞的物理特征(细胞大小和细胞颗粒度)以及不同的分子组成(细胞与单克隆抗体的反应性),将骨髓细胞的流式细胞术数据聚类为亚群。为了展示细胞亚群,我们基于一个聚类,根据5个流式细胞术参数的均值创建了一个彩色图谱。这样的图谱可以揭示在广泛使用的散点图中不明显的亚群特性。

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