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反硝化副球菌中两种可溶性铁(III)还原酶的分离与生化特性分析

Isolation and biochemical characterization of two soluble iron(III) reductases from Paracoccus denitrificans.

作者信息

Mazoch Jirí, Tesarík Radek, Sedlácek Vojtech, Kucera Igor, Turánek Jaroslav

机构信息

Department of Biochemistry, Faculty of Science, Masaryk University, Brno, Czech Republic.

出版信息

Eur J Biochem. 2004 Feb;271(3):553-62. doi: 10.1046/j.1432-1033.2003.03957.x.

Abstract

Two soluble enzymes (FerA and FerB) catalyzing the reduction of a number of iron(III) complexes by NADH, were purified to near homogeneity from the aerobically grown iron-limited culture of Paracoccus denitrificans using a combination of anion-exchange chromatography (Sepharose Q), chromatofocusing (Mono P), and gel permeation chromatography (Superose 12). FerA is a monomer with a molecular mass of 19 kDa, whereas FerB exhibited a molecular mass of about 55 kDa and consists of probably two identical subunits. FerA can be classified as an NADH:flavin oxidoreductase with a sequential reaction mechanism. It requires the addition of FMN or riboflavin for activity on Fe(III) substrates. In these reactions, the apparent substrate specificity of FerA seems to stem exclusively from different chemical reactivities of Fe(III) compounds with the free reduced flavin produced by the enzyme. Observations on reducibility of Fe(III) chelated by vicinal dihydroxy ligands support the view that FerA takes part in releasing iron from the catechol type siderophores synthesized by P. denitrificans. Contrary to FerA, the purified FerB contains a noncovalently bound redox-active FAD coenzyme, can utilize NADPH in place of NADH, does not reduce free FMN at an appreciable rate, and gives a ping-pong type kinetic pattern with NADH and Fe(III)-nitrilotriacetate as substrates. FerB is able to reduce chromate, in agreement with the fact that its N-terminus bears a homology to the previously described chromate reductase from Pseudomonas putida. Besides this, it also readily reduces quinones like ubiquinone-0 (Q0) or unsubstituted p-benzoquinone.

摘要

从反硝化副球菌在有氧条件下铁限制培养物中,通过阴离子交换色谱(琼脂糖Q)、色谱聚焦(Mono P)和凝胶渗透色谱(Superose 12)相结合的方法,纯化出了两种可催化NADH还原多种铁(III)配合物的可溶性酶(FerA和FerB),纯度接近均一。FerA是一种分子量为19 kDa的单体,而FerB的分子量约为55 kDa,可能由两个相同的亚基组成。FerA可归类为具有顺序反应机制的NADH:黄素氧化还原酶。它在Fe(III)底物上发挥活性需要添加FMN或核黄素。在这些反应中,FerA的表观底物特异性似乎完全源于Fe(III)化合物与该酶产生的游离还原黄素的不同化学反应性。对邻位二羟基配体螯合的Fe(III)的还原能力的观察结果支持了FerA参与从反硝化副球菌合成的儿茶酚型铁载体中释放铁的观点。与FerA相反,纯化的FerB含有一个非共价结合的氧化还原活性FAD辅酶,可以利用NADPH代替NADH,不以可观的速率还原游离FMN,并且以NADH和Fe(III)-次氮基三乙酸作为底物呈现乒乓型动力学模式。FerB能够还原铬酸盐,这与其N端与先前描述的恶臭假单胞菌铬酸盐还原酶具有同源性这一事实相符。除此之外,它还能轻易还原醌类物质,如泛醌-0(Q0)或未取代的对苯醌。

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