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从特拉诺瓦湾(南极罗斯海)分离出的可培养嗜冷海洋细菌的生物多样性。

Biodiversity of cultivable psychrotrophic marine bacteria isolated from Terra Nova Bay (Ross Sea, Antarctica).

作者信息

Michaud Luigi, Di Cello Francescopaolo, Brilli Matteo, Fani Renato, Lo Giudice Angelina, Bruni Vivia

机构信息

Department of Animal Biology and Marine Ecology, University of Messina, Salita Sperone 31, 98166 S. Agata, Messina, Italy.

出版信息

FEMS Microbiol Lett. 2004 Jan 15;230(1):63-71. doi: 10.1016/S0378-1097(03)00857-7.

Abstract

A set of 146 Antarctic marine isolates from the Ross Sea was characterized by a combination of molecular techniques in order to determine the degree of inter- and intraspecific variability. Isolates were analyzed by amplified rDNA restriction analysis (ARDRA) using the tetrameric enzyme AluI, resulting in 52 different groups, corresponding to at least 52 different bacterial species, indicating a high degree of interspecific variability. The phylogenetic position of bacteria belonging to some ARDRA groups was obtained by sequencing of 16S rDNA. Random amplified polymorphic DNA (RAPD) analysis, carried out on the largest ARDRA groups, revealed a high intraspecific genetic variability, too. The analysis of plasmid content revealed the existence of horizontal gene transfer between strains belonging to the same and to different species. A comparison of the whole body of morphological, physiological and biochemical data was finally carried out.

摘要

为了确定种间和种内变异程度,运用一系列分子技术对一组来自罗斯海的146株南极海洋分离菌进行了特征分析。使用四聚体酶AluI通过扩增核糖体DNA限制性分析(ARDRA)对分离菌进行分析,结果得到52个不同的组,对应至少52个不同的细菌物种,表明种间变异程度很高。通过对16S核糖体DNA进行测序,确定了一些ARDRA组中细菌的系统发育位置。对最大的ARDRA组进行随机扩增多态性DNA(RAPD)分析,也揭示了种内遗传变异程度很高。对质粒含量的分析表明,属于同一物种和不同物种的菌株之间存在水平基因转移。最后对所有形态、生理和生化数据进行了比较。

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