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疟原虫基因组注释与莽草酸途径之谜

Annotating the Plasmodium genome and the enigma of the shikimate pathway.

作者信息

McConkey Glenn A, Pinney John W, Westhead David R, Plueckhahn Kirsten, Fitzpatrick Teresa B, Macheroux Peter, Kappes Barbara

机构信息

Faculty of Biological Sciences, University of Leeds, Clarendon Way, LS2 9JT, Leeds, UK.

出版信息

Trends Parasitol. 2004 Feb;20(2):60-5. doi: 10.1016/j.pt.2003.11.001.

Abstract

The completion of the Plasmodium falciparum genome sequence heralds a new era in the effort to identify all the parasite's genes along with their cellular functions. A combination of bioinformatics and experimental proof will facilitate this process. Many enzymes in metabolic processes have been identified, but several examples exist of incomplete pathways, such as the shikimate pathway. This review uses the example of the shikimate pathway to examine the application of bioinformatics to lead experimental design in post-genomic biology.

摘要

恶性疟原虫基因组序列的完成预示着在识别该寄生虫所有基因及其细胞功能的努力中进入了一个新时代。生物信息学与实验证据相结合将推动这一进程。代谢过程中的许多酶已被识别出来,但存在一些途径不完整的例子,比如莽草酸途径。本综述以莽草酸途径为例,探讨生物信息学在基因组学后生物学中指导实验设计的应用。

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