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牛中195个基因的图谱绘制以及与人类、小鼠、大鼠和猪的更新比较图谱。

Mapping of 195 genes in cattle and updated comparative map with man, mouse, rat and pig.

作者信息

Hayes H, Elduque C, Gautier M, Schibler L, Cribiu E, Eggen A

机构信息

Laboratoire de Génétique biochimique et de Cytogénétique, INRA-CRJ, Jouy-en-Josas, France.

出版信息

Cytogenet Genome Res. 2003;102(1-4):16-24. doi: 10.1159/000075719.

Abstract

Our on-going goal is to improve and update the comparative genome organization between cattle and man but also among the most detailed mammalian species genomes i.e. cattle, mouse, rat and pig. In this work, we localized 195 genes in cattle and checked all human/bovine non-concordant localizations found in the literature. Next, we compiled all the genes mapped in cattle, goat, sheep and pig (2,166) for which the human ortholog with its chromosomal position is known, added corresponding data in mouse and rat, and ordered the genes relatively to the human genome sequence. We estimate that our compilation provides bovine mapping information for about 89% of the human autosomes. Thus, a near complete, overall and detailed picture of the number, distribution and extent of bovine conserved syntenies (regardless of gene order) on human R-banded autosomes is proposed as well as a comparison with mouse, rat and pig genomes.

摘要

我们当前的目标是改进并更新牛与人之间以及最详细的哺乳动物物种基因组(即牛、小鼠、大鼠和猪)之间的比较基因组组织。在这项工作中,我们在牛中定位了195个基因,并检查了文献中发现的所有人类/牛不一致定位。接下来,我们汇编了牛、山羊、绵羊和猪(2166个)中已定位的所有基因,其人类直系同源基因及其染色体位置已知,添加了小鼠和大鼠的相应数据,并根据人类基因组序列对基因进行排序。我们估计我们的汇编提供了约89%的人类常染色体的牛定位信息。因此,我们提出了一幅关于人类R带常染色体上牛保守同线性(不考虑基因顺序)的数量、分布和范围的近乎完整、全面且详细的图景,以及与小鼠、大鼠和猪基因组的比较。

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