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通过cDNA微阵列分析对自发性先天性单侧梗阻性尿路病动物模型的特征描述。

Characterization of an animal model of spontaneous congenital unilateral obstructive uropathy by cDNA microarray analysis.

作者信息

Seseke Florian, Thelen Paul, Ringert Rolf-Hermann

机构信息

Department of Urology, Georg-August-University, Robert-Koch-Str. 40, 37075 Göttingen, Germany.

出版信息

Eur Urol. 2004 Mar;45(3):374-81. doi: 10.1016/j.eururo.2003.10.010.

Abstract

INTRODUCTION

The pathophysiology of congenital obstructive uropathy has been studied intensively in several animal models. A reliable parameter for early detection of relevant obstruction is not yet identified. For further investigation of the complex regulatory events of obstructive uropathy, we used a cDNA microarray technology for a parallel differential expression analysis of about 15000 different genes of obstructed, contralateral and healthy kidneys of rats with spontaneous congenital obstructive uropathy.

METHODS

Total cellular RNA of obstructed, contralateral and healthy control kidneys of 32-35 days old rats was extracted and pooled. RNA quality and quantity was assessed using a Bioanalyzer 2100. mRNA expression for selected marker genes was assessed by real time PCR. High throughput gene expression profiling was performed with cDNA microarrays with differentially labeled cDNA targets.

RESULTS

Beside expected typical alterations of several growth factors such as TGF-beta, EGF, IGF-1, PDGF, we observed overexpression of extracellular matrix proteins and a decreased activity of antioxidant enzymes. Additionally, NFkappaB, a nuclear transcription factor involved in the development of interstitial fibrosis, was slightly up-regulated in the obstructed kidneys. Down-regulation of genes involved in tubular sodium transport indicated impaired concentration ability of the obstructed kidneys. Furthermore, we found up-regulation of pro-apoptotic genes including transcripts for the proapoptotic protein Siva. Interestingly, TNFalpha, another factor involved in the pathophysiology of congenital obstructive uropathy, was not differentially regulated.

CONCLUSIONS

The alterations of the genes for growth factors, extracellular matrix proteins, antioxidant enzymes, sodium transport and genes involved in apoptosis support the representative character of this animal model for congenital obstructive uropathy. In the rather advanced stage of congenital renal obstruction a possible explanation of the lacking differential regulation of TNFalpha highlights it as a possible marker of earlier stages of obstruction. Furthermore, the possible involvement of the Siva/CD27 pathway in the apoptotic cascade also offers a new possibility to find a sensitive marker to detect renal obstruction already in an earlier stage.

摘要

引言

先天性梗阻性肾病的病理生理学已在多种动物模型中得到深入研究。目前尚未确定早期检测相关梗阻的可靠参数。为了进一步研究梗阻性肾病复杂的调节事件,我们使用cDNA微阵列技术对患有自发性先天性梗阻性肾病大鼠的梗阻肾、对侧肾和健康肾中约15000个不同基因进行平行差异表达分析。

方法

提取32 - 35日龄大鼠梗阻肾、对侧肾和健康对照肾的总细胞RNA并合并。使用Bioanalyzer 2100评估RNA的质量和数量。通过实时PCR评估选定标记基因的mRNA表达。使用带有差异标记cDNA靶标的cDNA微阵列进行高通量基因表达谱分析。

结果

除了预期的几种生长因子(如转化生长因子-β、表皮生长因子、胰岛素样生长因子-1、血小板衍生生长因子)的典型改变外,我们还观察到细胞外基质蛋白的过表达和抗氧化酶活性的降低。此外,参与间质纤维化发展的核转录因子核因子κB在梗阻肾中略有上调。参与肾小管钠转运的基因下调表明梗阻肾的浓缩能力受损。此外,我们发现促凋亡基因上调,包括促凋亡蛋白Siva的转录本。有趣的是,另一个参与先天性梗阻性肾病病理生理学的因子肿瘤坏死因子α没有差异调节。

结论

生长因子、细胞外基质蛋白、抗氧化酶、钠转运及凋亡相关基因的改变支持了该动物模型对先天性梗阻性肾病的代表性。在先天性肾梗阻的相当晚期,肿瘤坏死因子α缺乏差异调节的一个可能解释是它可能是梗阻早期阶段的一个标志物。此外,Siva/CD27途径可能参与凋亡级联反应,这也为寻找在更早阶段检测肾梗阻的敏感标志物提供了新的可能性。

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