一种通过整合数据源进行基于基因表达的PubMed检索工具。
A tool for gene expression based PubMed search through combining data sources.
作者信息
Korotkiy Maksym, Middelburg Rutger, Dekker Henk, van Harmelen Frank, Lankelma Jan
机构信息
Division of Computer Science, VU University Medical Center, Vrije Universiteit, Amsterdam, The Netherlands.
出版信息
Bioinformatics. 2004 Aug 12;20(12):1980-2. doi: 10.1093/bioinformatics/bth183. Epub 2004 Mar 25.
UNLABELLED
We present a new tool for the semi-automated querying of PubMed using a batch of tens to thousands of GenBank accession numbers or UniGene cluster ids. By combining information from UniGene and SWISS-PROT, microGENIE obtains information on the biological relevance of expressed genes, as identified by micro-array experiments, with minimal user intervention and time investment.
AVAILABILITY
microGENIE is freely available from http://www.cs.vu.nl/microgenie
SUPPLEMENTARY INFORMATION
The web site above supplies examples of input and output files.
未标注
我们展示了一种新工具，可使用一批从几十到数千个的GenBank登录号或UniGene簇ID对PubMed进行半自动查询。通过整合来自UniGene和SWISS-PROT的信息，microGENIE以最少的用户干预和时间投入，获取通过微阵列实验鉴定的表达基因的生物学相关性信息。
可用性
可从http://www.cs.vu.nl/microgenie免费获取microGENIE。
补充信息
上述网站提供输入和输出文件的示例。
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