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人类次黄嘌呤磷酸核糖转移酶突变数据库:数据录入与检索软件。

Human HPRT mutant database: software for data entry and retrieval.

作者信息

Cariello N F, Craft T R, Vrieling H, van Zeeland A A, Adams T, Skopek T R

机构信息

Pathology Department, University of North Carolina, Chapel Hill 27599.

出版信息

Environ Mol Mutagen. 1992;20(2):81-3. doi: 10.1002/em.2850200202.

Abstract

We have developed a computer database containing information on over 1,000 human hypoxanthine guanine phosphoribosyl transferase (HPRT) mutants. Both published and unpublished data are present. The database itself is maintained in a dBASE format (.DBF) and we provide a set of programs to examine and extract information from the database. A program to input information into the database is also supplied. The database and programs are available directly from us or via remote FTP (file transfer protocol) using BITNET/INTERNET. All programs require an IBM-compatible computer, the MS-DOS operating system (version 3.3 or greater), and a hard disk with about 5 megabytes of free disk space. The purpose of the database is 1) to allow investigators to contribute their HPRT mutants directly to the database in a standardized fashion, and 2) to allow access to the entire database with a set of programs that allows manipulation and extraction of data. For example, using our programs it is possible to i) order the database by base pair position, ii) examine only information regarding mutagenesis by a particular agent, iii) search for a particular author, iv) create a report which contains selected portions of the database, the report can be printed or saved as a file. The database will be updated every several months and distributed.

摘要

我们开发了一个计算机数据库,其中包含1000多种人类次黄嘌呤鸟嘌呤磷酸核糖转移酶(HPRT)突变体的信息。既有已发表的数据,也有未发表的数据。数据库本身以dBASE格式(.DBF)保存,我们提供了一组程序来检查和从数据库中提取信息。还提供了一个将信息输入数据库的程序。数据库和程序可直接从我们这里获取,也可通过使用BITNET/INTERNET的远程FTP(文件传输协议)获取。所有程序都需要一台IBM兼容计算机、MS-DOS操作系统(版本3.3或更高)以及一个约有5兆字节可用磁盘空间的硬盘。该数据库的目的是:1)允许研究人员以标准化方式将他们的HPRT突变体直接贡献到数据库中;2)通过一组允许数据操作和提取的程序来访问整个数据库。例如,使用我们的程序可以:i)按碱基对位置对数据库进行排序;ii)仅查看关于特定诱变剂诱变的信息;iii)搜索特定作者;iv)创建一份包含数据库选定部分的报告,该报告可以打印或保存为文件。数据库将每隔几个月更新并分发一次。

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