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2'-O-甲基修饰的硫代磷酸酯反义寡核苷酸在体外具有降低的非特异性效应。

2'-O-methyl-modified phosphorothioate antisense oligonucleotides have reduced non-specific effects in vitro.

作者信息

Yoo Byong Hoon, Bochkareva Elena, Bochkarev Alexey, Mou Tung-Chung, Gray Donald M

机构信息

Department of Molecular and Cell Biology, Mail Stop FO31, The University of Texas at Dallas, PO Box 830688, Richardson, TX 75083-0688, USA.

出版信息

Nucleic Acids Res. 2004 Apr 2;32(6):2008-16. doi: 10.1093/nar/gkh516. Print 2004.

DOI:10.1093/nar/gkh516
PMID:15064360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC390367/
Abstract

Antisense oligodeoxynucleotides (ODNs) have biological activity in treating various forms of cancer. The antisense effects of two types of 20mer ODNs, phosphorothioate-modified ODNs (S-ODNs) and S-ODNs with 12 2'-O-methyl groups (Me-S-ODNs), targeted to sites 109 and 277 of bcl-2 mRNA, were compared. Both types were at least as effective as G3139 (Genta, Inc.) in reducing the level of Bcl-2 protein in T24 cells following a 4 h transfection at a dose of 0.1 micro M. Circular dichroism spectra showed that both types formed A-form duplexes with the complementary RNA, and the melting temperatures were in the order of Me-S-ODN.RNA > normal DNA.RNA > S-ODN.RNA. In comparison with the S-ODN, the Me-S-ODN had reduced toxic growth inhibitory effects, was less prone to bind the DNA-binding domain A of human replication protein A, and was as resistant to serum nucleases. Neither type of oligomer induced apoptosis, according to a PARP-cleavage assay. Hybrids formed with Me-S-ODN sequences were less sensitive to RNase H degradation than those formed with S-ODN sequences. Despite this latter disadvantage, the addition of 2'-O-methyl groups to a phosphorothioate-modified ODN is advantageous because of increased stability of binding and reduced non-specific effects.

摘要

反义寡脱氧核苷酸(ODNs)在治疗多种癌症方面具有生物活性。比较了两种20聚体ODN,即硫代磷酸酯修饰的ODN(S-ODNs)和带有12个2'-O-甲基的S-ODN(Me-S-ODNs)对bcl-2 mRNA 109位和277位位点的反义作用。在0.1 μM剂量下转染4小时后,这两种类型的ODN在降低T24细胞中Bcl-2蛋白水平方面至少与G3139(Genta公司)一样有效。圆二色光谱表明,这两种类型的ODN均与互补RNA形成A-型双链体,解链温度顺序为Me-S-ODN.RNA>正常DNA.RNA>S-ODN.RNA。与S-ODN相比,Me-S-ODN的毒性生长抑制作用降低,与人复制蛋白A的DNA结合结构域A结合的倾向较小,并且对血清核酸酶具有抗性。根据PARP切割试验,这两种类型的寡聚物均未诱导细胞凋亡。与Me-S-ODN序列形成的杂交体比与S-ODN序列形成的杂交体对RNase H降解的敏感性更低。尽管有后一个缺点,但由于结合稳定性增加和非特异性作用降低,在硫代磷酸酯修饰的ODN上添加2'-O-甲基是有利的。

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From RPA to BRCA2: lessons from single-stranded DNA binding by the OB-fold.从RPA到BRCA2:OB折叠对单链DNA结合的启示
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