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1
Structure and mechanism of the RNA polymerase II transcription machinery.
Nat Struct Mol Biol. 2004 May;11(5):394-403. doi: 10.1038/nsmb763.
2
Structural basis of transcription: separation of RNA from DNA by RNA polymerase II.
Science. 2004 Feb 13;303(5660):1014-6. doi: 10.1126/science.1090839.
3
The RNA polymerase II core promoter.
Annu Rev Biochem. 2003;72:449-79. doi: 10.1146/annurev.biochem.72.121801.161520. Epub 2003 Mar 19.
4
Eukaryotic transcription initiation machinery visualized at molecular level.
Transcription. 2016 Oct 19;7(5):203-208. doi: 10.1080/21541264.2016.1237150.
5
RNA polymerase II as a control panel for multiple coactivator complexes.
Curr Opin Genet Dev. 1999 Apr;9(2):132-9. doi: 10.1016/S0959-437X(99)80020-3.
6
Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.
Science. 2004 Feb 13;303(5660):983-8. doi: 10.1126/science.1090838.
9
Finding the right spot to start transcription.
Nat Struct Mol Biol. 2007 Aug;14(8):686-7. doi: 10.1038/nsmb0807-686.
10
A new era of studying p53-mediated transcription activation.
Transcription. 2018;9(2):102-107. doi: 10.1080/21541264.2017.1345354. Epub 2017 Oct 4.

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1
EPI-DynFusion: enhancer-promoter interaction prediction model based on sequence features and dynamic fusion mechanisms.
Front Genet. 2025 Jul 23;16:1614222. doi: 10.3389/fgene.2025.1614222. eCollection 2025.
2
Selective phase separation of transcription factors is driven by orthogonal molecular grammar.
Nat Commun. 2025 Mar 31;16(1):3087. doi: 10.1038/s41467-025-58445-7.
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Hypoxia-inducible factor in cancer: from pathway regulation to therapeutic opportunity.
BMJ Oncol. 2024 Feb 1;3(1):e000154. doi: 10.1136/bmjonc-2023-000154. eCollection 2024.
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Single-molecule imaging for investigating the transcriptional control.
Mol Cells. 2025 Feb;48(2):100179. doi: 10.1016/j.mocell.2025.100179. Epub 2025 Jan 13.
7
Transcriptional coupling of telomeric retrotransposons with the cell cycle.
Sci Adv. 2025 Jan 3;11(1):eadr2299. doi: 10.1126/sciadv.adr2299.
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Distinct effects of CDK8 module subunits on cellular growth and proliferation in Drosophila.
Development. 2024 Dec 1;151(23). doi: 10.1242/dev.203111. Epub 2024 Nov 29.
9
The general transcription factors (GTFs) of RNA polymerase II and their roles in plant development and stress responses.
Crit Rev Biochem Mol Biol. 2024 Oct;59(5):267-309. doi: 10.1080/10409238.2024.2408562. Epub 2024 Oct 3.
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Genome-scale chromatin binding dynamics of RNA Polymerase II general transcription machinery components.
EMBO J. 2024 May;43(9):1799-1821. doi: 10.1038/s44318-024-00089-2. Epub 2024 Apr 2.

本文引用的文献

1
Structural basis of transcription: separation of RNA from DNA by RNA polymerase II.
Science. 2004 Feb 13;303(5660):1014-6. doi: 10.1126/science.1090839.
2
Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.
Science. 2004 Feb 13;303(5660):983-8. doi: 10.1126/science.1090838.
3
Two cyclin-dependent kinases promote RNA polymerase II transcription and formation of the scaffold complex.
Mol Cell Biol. 2004 Feb;24(4):1721-35. doi: 10.1128/MCB.24.4.1721-1735.2004.
7
Topography of the euryarchaeal transcription initiation complex.
J Biol Chem. 2004 Feb 13;279(7):5894-903. doi: 10.1074/jbc.M311429200. Epub 2003 Nov 13.
8
Transcription factor B contacts promoter DNA near the transcription start site of the archaeal transcription initiation complex.
J Biol Chem. 2004 Jan 23;279(4):2825-31. doi: 10.1074/jbc.M311433200. Epub 2003 Nov 3.
9
RNA polymerase II/TFIIF structure and conserved organization of the initiation complex.
Mol Cell. 2003 Oct;12(4):1003-13. doi: 10.1016/s1097-2765(03)00387-3.

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