Choi Young Hae, Tapias Elisabet Casas, Kim Hye Kyong, Lefeber Alfons W M, Erkelens Cornelis, Verhoeven Jacobus Th J, Brzin Jernej, Zel Jana, Verpoorte Robert
Division of Pharmacognosy, Section Metabolomics, Institute of Biology, Leiden University, 2300 RA Leiden, The Netherlands.
Plant Physiol. 2004 Aug;135(4):2398-410. doi: 10.1104/pp.104.041012. Epub 2004 Jul 30.
A comprehensive metabolomic profiling of Catharanthus roseus L. G. Don infected by 10 types of phytoplasmas was carried out using one-dimensional and two-dimensional NMR spectroscopy followed by principal component analysis (PCA), an unsupervised clustering method requiring no knowledge of the data set and used to reduce the dimensionality of multivariate data while preserving most of the variance within it. With a combination of these techniques, we were able to identify those metabolites that were present in different levels in phytoplasma-infected C. roseus leaves than in healthy ones. The infection by phytoplasma in C. roseus leaves causes an increase of metabolites related to the biosynthetic pathways of phenylpropanoids or terpenoid indole alkaloids: chlorogenic acid, loganic acid, secologanin, and vindoline. Furthermore, higher abundance of Glc, Glu, polyphenols, succinic acid, and Suc were detected in the phytoplasma-infected leaves. The PCA of the (1)H-NMR signals of healthy and phytoplasma-infected C. roseus leaves shows that these metabolites are major discriminating factors to characterize the phytoplasma-infected C. roseus leaves from healthy ones. Based on the NMR and PCA analysis, it might be suggested that the biosynthetic pathway of terpenoid indole alkaloids, together with that of phenylpropanoids, is stimulated by the infection of phytoplasma.
利用一维和二维核磁共振光谱,对感染10种植原体的长春花进行了全面的代谢组学分析,随后进行主成分分析(PCA),这是一种无需了解数据集的无监督聚类方法,用于降低多变量数据的维度,同时保留其中的大部分方差。通过这些技术的结合,我们能够鉴定出在感染植原体的长春花叶片中与健康叶片中含量不同的那些代谢物。长春花叶片感染植原体导致与苯丙烷类或萜类吲哚生物碱生物合成途径相关的代谢物增加:绿原酸、马钱子酸、裂环马钱子苷和文多灵。此外,在感染植原体的叶片中检测到较高含量的葡萄糖、谷氨酸、多酚、琥珀酸和蔗糖。健康和感染植原体的长春花叶片的氢核磁共振信号的主成分分析表明,这些代谢物是区分感染植原体的长春花叶片和健康叶片的主要判别因素。基于核磁共振和主成分分析,可能表明萜类吲哚生物碱的生物合成途径以及苯丙烷类的生物合成途径受到植原体感染的刺激。