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鲟鱼基因组中古老卫星DNA的进化

Evolution of ancient satellite DNAs in sturgeon genomes.

作者信息

Robles Francisca, de la Herrán Roberto, Ludwig Arne, Ruiz Rejón Carmelo, Ruiz Rejón Manuel, Garrido-Ramos Manuel A

机构信息

Departamento de Genética, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain.

出版信息

Gene. 2004 Aug 18;338(1):133-42. doi: 10.1016/j.gene.2004.06.001.

Abstract

This study characterizes a repetitive DNA family of sequences in sturgeon, the PstI satellite DNA. We have found a high degree of preservation for these sequences, which are present in all 13 species analyzed, including within the genera Acipenser, Huso, and Scaphirhynchus of the family Acipenseridae. This is one of the most ancient satellite DNAs found to date, because it has been estimated to be more than 100 million years old. Alternatively, to the current view that most satellite DNAs are species-specific or preserved in a few closely related species, the PstI family and other previously characterized sturgeon satellite DNA, the HindIII, represent the most fascinating exceptions to the rapid sequence change usually undergone by satellite DNAs. Here, we compare the evolutionary pattern of these two satellite DNA families, PstI and HindIII, which differ markedly in length, sequence, and nucleotide composition. We have found that, in contrast to the situation in most other living beings, a high degree of preservation, a slow sequence change rate and slowed concerted evolution, appears to be a general rule for sturgeon satellite DNAs. The possible causes for all these features are discussed in the light of the evolutionary specifics found within these ancient organisms.

摘要

本研究对鲟鱼中的一个重复DNA序列家族——PstI卫星DNA进行了特征描述。我们发现这些序列具有高度的保守性,在所分析的所有13个物种中均有存在,包括鲟科的鲟属、鳇属和铲鲟属。这是迄今为止发现的最古老的卫星DNA之一,据估计其年代超过1亿年。与目前大多数卫星DNA是物种特异性的或仅在少数密切相关物种中保守的观点不同,PstI家族以及其他先前已描述的鲟鱼卫星DNA——HindIII,是卫星DNA通常经历的快速序列变化的最引人注目的例外。在这里,我们比较了这两个卫星DNA家族PstI和HindIII的进化模式,它们在长度、序列和核苷酸组成上有显著差异。我们发现,与大多数其他生物的情况不同,高度保守、缓慢的序列变化速率和缓慢的协同进化似乎是鲟鱼卫星DNA的普遍规律。根据在这些古老生物中发现的进化特征,讨论了所有这些特征的可能原因。

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