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通过扩增片段长度多态性(AFLP)揭示的西地中海岛屿特有濒危物种柠条锦鸡儿的变异模式和基因流

Patterns of variability and gene flow in Medicago citrina, an endangered endemic of islands in the western Mediterranean, as revealed by amplified fragment length polymorphism (AFLP).

作者信息

Juan A, Crespo M B, Cowan R S, Lexer C, Fay M F

机构信息

Instituto Universitario de Investigación-Centro Iberoamericano de la Biodiversidad, Universidad de Alicante, PO Box 99, E-03080, Spain.

出版信息

Mol Ecol. 2004 Sep;13(9):2679-90. doi: 10.1111/j.1365-294X.2004.02289.x.

DOI:10.1111/j.1365-294X.2004.02289.x
PMID:15315680
Abstract

Medicago citrina is an endangered western Mediterranean endemic that grows only on small islets of the Balearic archipelago and off the eastern Spanish coast. Only 10 isolated subpopulations are currently known (four from Ibiza, three from Cabrera, two from Columbretes and one from an offshore islet in northern Alicante province), constituting a severely fragmented genetic system. Data were analysed with the unweighted pair-group method using arithmetic averages (UPGMA) and principle coordinates analysis (PCOA), revealing several distinct groups. Genetic diversity indices indicated that Ibizan subpopulations had the highest genetic variability (Nei's index: 0.1463; Shannon's index: 0.228), whereas the lowest variability was found in Alicante (Nei's index: 0.035; Shannon's index: 0.050) and Cabrera (Nei's index: 0.068; Shannon's index: 0.104). These latter populations show the highest FST values (FST = 0.548) revealing high differentiation between them. Columbretes subpopulations formed a defined single group, although it also included some Ibizan samples. The smallest FST values, obtained between Ibiza and Columbretes (FST = 0.185), are not correlated with geographical proximity, but appear to be related to the geologically recent volcanic origin of the Columbretes islands (300,000 years ago). According to the distribution of the Ibizan samples in the dendrogram and the FST values, the best hypothesis is to regard the Ibizan subpopulations as the centre of genetic diversity of the currently known subpopulations. Our results suggest migratory scenarios from Ibiza to Columbretes based mainly on zoochory probably by seabirds. Finally, recommendations are provided for management strategies to facilitate the conservation of this endangered species.

摘要

柠条苜蓿是一种濒危的西地中海特有植物,仅生长在巴利阿里群岛的小岛上以及西班牙东海岸外。目前已知仅有10个孤立的亚种群(4个来自伊维萨岛,3个来自卡布雷拉岛,2个来自科伦布雷特群岛,1个来自阿利坎特省北部近海的一个小岛),构成了一个严重碎片化的遗传系统。使用算术平均数的非加权配对组方法(UPGMA)和主坐标分析(PCOA)对数据进行了分析,揭示了几个不同的组。遗传多样性指数表明,伊维萨岛的亚种群具有最高的遗传变异性(内氏指数:0.1463;香农指数:0.228),而阿利坎特省(内氏指数:0.035;香农指数:0.050)和卡布雷拉岛(内氏指数:0.068;香农指数:0.104)的变异性最低。后两个种群显示出最高的FST值(FST = 0.548),表明它们之间存在高度分化。科伦布雷特群岛的亚种群形成了一个明确的单一群体,尽管其中也包括一些伊维萨岛的样本。在伊维萨岛和科伦布雷特群岛之间获得的最小FST值(FST = 0.185)与地理距离无关,似乎与科伦布雷特群岛地质上较新的火山起源(30万年前)有关。根据伊维萨岛样本在聚类图中的分布和FST值,最佳假设是将伊维萨岛的亚种群视为目前已知亚种群的遗传多样性中心。我们的结果表明,主要基于可能由海鸟进行的动物传播,存在从伊维萨岛到科伦布雷特群岛的迁徙情况。最后,为促进对这种濒危物种的保护提供了管理策略建议。

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