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来自深海蛤 Calyptogena kaikoi 的精氨酸激酶的冷适应特征。

Cold-adapted features of arginine kinase from the deep-sea clam Calyptogena kaikoi.

机构信息

Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780-8520, Japan.

出版信息

Mar Biotechnol (NY). 2012 Jun;14(3):294-303. doi: 10.1007/s10126-011-9411-6. Epub 2011 Oct 21.

Abstract

The heterodont clam Calyptogena kaikoi, which inhabits depths exceeding 3,500 m where low ambient temperatures prevail, has an unusual two-domain arginine kinase (AK) with molecular mass of 80 kDa, twice that of typical AKs. The purpose of this work is to investigate the nature of the adaptations of this AK for functioning at low temperatures. Recombinant C. kaikoi AK constructs were expressed, and their two-substrate kinetic constants (k(cat), K(a), and K(ia)) were determined at 10°C and 25°C, respectively. When measured at 25°C, the K(ia) values were tenfold larger than those for corresponding K(a) values, while at 10°C, the K(ia) values decreased remarkably, but the K (a) values were almost unchanged. The Calyptogena two-domain enzyme has threefold higher catalytic efficiency, calculated by k (cat)/(K(a)(ARG)·K(ia)(ATP) ), at 10°C, than that at 25°C, reflecting adaptation for function at reduced ambient temperatures. The activation energy (E(a)) and thermodynamic parameters were determined for Calyptogena two-domain enzyme and compared with those of two-domain enzymes from mesophilic Corbicula and Anthopleura. The value for E(a) of Calyptogena enzyme were about half of those for mesophilic enzymes, and a larger decrease in entropy was observed in Calyptogena AK reaction. Although large decrease in entropy increases the ΔG(o‡) value and consequently lowers the k(cat) value, this is compensated with its lower E(a) value thereby minimizing the reduction in its k(cat) value. These thermodynamic properties, together with the kinetic ones, are also present in the separated domain 2 of the Calyptogena two-domain enzyme.

摘要

异齿蛤 Calyptogena kaikoi 栖息在水深超过 3500 米、环境温度较低的海域,其具有独特的双结构域精氨酸激酶(AK),分子量为 80 kDa,是典型 AK 的两倍。本研究旨在探讨这种 AK 在低温下发挥作用的适应特性。构建了重组 C. kaikoi AK 表达载体,并在 10°C 和 25°C 下测定其双底物动力学常数(k(cat)、K(a)和 K(ia))。在 25°C 下测量时,K(ia)值是 K(a)值的十倍,而在 10°C 下,K(ia)值显著降低,但 K(a)值几乎不变。与 25°C 相比,Calyptogena 双结构域酶在 10°C 时的催化效率(k(cat)/(K(a)(ARG)·K(ia)(ATP) )提高了三倍,反映了其在环境温度降低时的适应能力。测定了 Calyptogena 双结构域酶的活化能(E(a))和热力学参数,并与来自嗜温的 Corbicula 和 Anthopleura 的双结构域酶进行了比较。Calyptogena 酶的 E(a)值约为嗜温酶的一半,并且在 Calyptogena AK 反应中观察到更大的熵减少。尽管熵的大幅减少增加了 ΔG(o‡)值,从而降低了 k(cat)值,但这与其较低的 E(a)值相补偿,从而最小化了 k(cat)值的降低。这些热力学特性与动力学特性一起存在于 Calyptogena 双结构域酶的分离结构域 2 中。

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