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基于18S rDNA序列的粘孢子虫和放射孢子虫群落中的分子关系与系统发育

Molecular relationships and phylogeny in a community of myxosporeans and actinosporeans based on their 18S rDNA sequences.

作者信息

Holzer Astrid S, Sommerville Christina, Wootten Rodney

机构信息

Institute of Aquaculture, University of Stirling, Stirling FK9 4LA, Scotland, UK.

出版信息

Int J Parasitol. 2004 Sep;34(10):1099-111. doi: 10.1016/j.ijpara.2004.06.002.

Abstract

The community of myxosporeans and actinosporeans inhabiting a typical Scottish highland stream and the outflow area of an adjacent salmon hatchery was analysed on the basis of their 18S rDNA sequences. Nine myxosporeans belonging to the genera Sphaerospora, Chloromyxum, Zschokkella, Myxidium, Hoferellus and Myxobilatus were identified from mature spores in different organs of the fish species present. Twelve actinosporean types belonging to the collective groups of neoactinomyxum, aurantiactinomyxon, raabeia, echinactinomyxon and synactinomyxon were found to be released from oligochaete worms collected from sediments. Twenty of the 21 sequences obtained from these myxozoans are new entries to the myxozoan database, and the genera Chloromyxum, Hoferellus and Myxobilatus were entered for the first time. Study of the molecular relationships between the different taxa and with other myxozoan sequences available showed that the myxosporeans inhabiting the urinary system clearly cluster together, independently of host species or spore morphology. However, the sequences of the two Sphaerospora species encountered show considerable differences from other members of this group and all other freshwater myxosporeans, and they were found to occupy an ancestral marine position. Three actinosporeans, i.e. Neoactinomyxum eiseniellae, Aurantiactinomyxon pavinsis and Raabeia 'type 3' were found to represent alternate life cycle stages of Chloromyxum sp., Chloromyxum truttae and Myxidium truttae, respectively (approximately 1400 identical base pairs each). Three other actinosporeans encountered (two echinactinomyxon and one raabeia type) showed over 92% sequence identity with myxosporeans from GenBank, whereas all other actinosporeans formed a closely related group devoid of any known myxosporeans.

摘要

基于18S rDNA序列,对栖息在典型苏格兰高地溪流及相邻鲑鱼孵化场流出区域的粘孢子虫和放射孢子虫群落进行了分析。从所存在鱼类物种的不同器官中的成熟孢子中鉴定出9种属于球孢虫属、绿粘孢虫属、茨氏孢虫属、粘体虫属、霍氏孢虫属和粘盘孢虫属的粘孢子虫。从沉积物中采集的寡毛纲蠕虫中发现了12种属于新放射孢子虫、橙黄放射孢子虫、拉贝孢虫、棘放射孢子虫和联合放射孢子虫集合组的放射孢子虫类型。从这些粘孢子虫获得的21个序列中有20个是粘孢子虫数据库的新条目,绿粘孢虫属、霍氏孢虫属和粘盘孢虫属是首次录入。对不同分类群之间以及与其他现有粘孢子虫序列的分子关系研究表明,栖息在泌尿系统的粘孢子虫明显聚集在一起,与宿主物种或孢子形态无关。然而,所遇到的两种球孢虫属物种的序列与该组的其他成员以及所有其他淡水粘孢子虫有很大差异,并且发现它们占据着祖先的海洋位置。发现三种放射孢子虫,即艾氏新放射孢子虫、帕氏橙黄放射孢子虫和“3型”拉贝孢虫分别代表绿粘孢虫属物种、鲑绿粘孢虫和鲑粘体虫的交替生命周期阶段(每个约有1400个相同碱基对)。遇到的另外三种放射孢子虫(两种棘放射孢子虫和一种拉贝孢虫类型)与GenBank中的粘孢子虫序列同一性超过92%,而所有其他放射孢子虫形成了一个与任何已知粘孢子虫无关的密切相关的群体。

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