Daranas Antonio Hernandez, Shimizu Hiroki, Homans Steve W
Astbury Centre for Structural Molecular Biology, School of Biochemistry and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
J Am Chem Soc. 2004 Sep 29;126(38):11870-6. doi: 10.1021/ja048054m.
We report the thermodynamics of binding of d-galactose and deoxy derivatives thereof to the arabinose binding protein (ABP). The "intrinsic" (solute-solute) free energy of binding DeltaG degrees (int) at 308 K for the 1-, 2-, 3-, and 6-hydroxyl groups of galactose is remarkably constant (approximately -30 kJ/mol), despite the fact that each hydroxyl group subtends different numbers of hydrogen bonds in the complex. The substantially unfavorable enthalpy of binding (approximately 30 kJ/mol) of 1-deoxygalactose, 2-deoxygalactose, and 3-deoxygalactose in comparison with galactose, cannot be readily accounted for by differences in solvation, suggesting that solute-solute hydrogen bonds are enthalpically significantly more favorable than solute-solvent hydrogen bonds. In contrast, the substantially higher affinity for 2-deoxygalactose in comparison with either 1-deoxygalactose or 3-deoxygalactose derives from differences in the solvation free energies of the free ligands.
我们报道了d-半乳糖及其脱氧衍生物与阿拉伯糖结合蛋白(ABP)结合的热力学。在308 K时,半乳糖1-、2-、3-和6-羟基的“内在”(溶质-溶质)结合自由能ΔG°(int)非常恒定(约为-30 kJ/mol),尽管每个羟基在复合物中形成的氢键数量不同。与半乳糖相比,1-脱氧半乳糖、2-脱氧半乳糖和3-脱氧半乳糖的结合焓显著不利(约为30 kJ/mol),溶剂化差异难以解释这一现象,这表明溶质-溶质氢键在焓上比溶质-溶剂氢键更有利。相比之下,2-脱氧半乳糖与1-脱氧半乳糖或3-脱氧半乳糖相比具有更高的亲和力,这源于游离配体溶剂化自由能的差异。