Lin Yi-Chueh, Uemori Kazunori, de Briel Dominique A, Arunpairojana Vallapa, Yokota Akira
Laboratory of Bioresources, Institute of Molecular and Cellular Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.
DADB, Service de Microbiologie, Hôpital Louis-Pasteur, Hôpitaux Civils, 68024 Colmar, France.
Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1669-1676. doi: 10.1099/ijs.0.02741-0.
Seven strains of actinobacteria, isolated from soil, wounds, urine, cow faeces, human blood and butter, were characterized by a polyphasic approach to clarify their taxonomic position. On the basis of chemotaxonomy, 16S rRNA gene analysis and DNA relatedness, strain IAM 14851T can be classified within the cluster of the genus Leucobacter and is proposed as a novel species, Leucobacter albus sp. nov., with strain IAM 14851T (=TISTR 1515T) as the type strain. The other six strains formed a phylogenetically separate branch in the family Microbacteriaceae, having the following characteristics: the major menaquinones are MK-8 to MK-10, the DNA G + C content ranges from 62 to 68 mol%, the diamino acid in the cell wall is diaminobutyric acid and the muramic acid in the peptidoglycan is of the acetyl type. The major fatty acids are 12-methyltetradecanoic acid (anteiso-C(15 : 0)), hexadecanoic acid (C(16 : 0)), 14-methyl-pentadecanoic acid (iso-C(16 : 0)) and 14-methyl-hexadecanoic acid (anteiso-C(17 : 0)). On the basis of morphological, physiological and chemotaxonomic characteristics, together with DNA-DNA hybridization and 16S rRNA gene sequence comparison, the novel genus Zimmermannella gen. nov. is proposed for these six strains. Four novel species are proposed: Zimmermannella helvola sp. nov. (type species; type strain IAM 14726T = NBRC 15775T = DSM 20419T = TISTR 1509T), Zimmermannella alba sp. nov. (type strain IAM 14724T = NBRC 15616T = TISTR 1510T), Zimmermannella bifida sp. nov. (type strain IAM 14848T = TISTR 1511T) and Zimmermannella faecalis sp. nov. (type strain IAM 15030T = NBRC 15706T = ATCC 13722T = TISTR 1514T).
从土壤、伤口、尿液、牛粪、人血和黄油中分离出7株放线菌,采用多相分类法对其进行表征,以阐明它们的分类地位。基于化学分类学、16S rRNA基因分析和DNA相关性,菌株IAM 14851T可归为无色杆菌属簇内,并被提议为一个新物种,即白色无色杆菌(Leucobacter albus sp. nov.),以菌株IAM 14851T(=TISTR 1515T)作为模式菌株。其他6株在微杆菌科中形成一个系统发育上独立的分支,具有以下特征:主要甲基萘醌为MK-8至MK-10,DNA G + C含量范围为62至68 mol%,细胞壁中的二氨基酸为二氨基丁酸,肽聚糖中的胞壁酸为乙酰型。主要脂肪酸为12-甲基十四烷酸(anteiso-C(15 : 0))、十六烷酸(C(16 : 0))、14-甲基十五烷酸(iso-C(16 : 0))和14-甲基十六烷酸(anteiso-C(17 : 0))。基于形态、生理和化学分类学特征,以及DNA-DNA杂交和16S rRNA基因序列比较,为这6株菌提议建立一个新属,即齐默尔曼氏菌属(Zimmermannella gen. nov.)。提议了4个新物种:浅黄齐默尔曼氏菌(Zimmermannella helvola sp. nov.)(模式种;模式菌株IAM 14726T = NBRC 15775T = DSM 20419T = TISTR 1509T)、白色齐默尔曼氏菌(Zimmermannella alba sp. nov.)(模式菌株IAM 14724T = NBRC 15616T = TISTR 1510T)、双歧齐默尔曼氏菌(Zimmermannella bifida sp. nov.)(模式菌株IAM 14848T = TISTR 1511T)和粪栖齐默尔曼氏菌(Zimmermannella faecalis sp. nov.)(模式菌株IAM 15030T = NBRC 15706T = ATCC 13722T = TISTR 1514T)。