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微小隐孢子虫肌动蛋白基因的分离、测序及分子核型分析

Isolation, sequence and molecular karyotype analysis of the actin gene of Cryptosporidium parvum.

作者信息

Kim K, Goozé L, Petersen C, Gut J, Nelson R G

机构信息

Parasitology Laboratory, San Francisco General Hospital, CA.

出版信息

Mol Biochem Parasitol. 1992 Jan;50(1):105-13. doi: 10.1016/0166-6851(92)90248-i.

Abstract

Actin is an ubiquitous and highly conserved microfilament protein which is hypothesized to play a mechanical, force-generating role in the unusual gliding motility of sporozoan zoites and in their active penetration of host cells. We have identified and isolated an actin gene from a Cryptosporidium parvum genomic DNA library using a chicken beta-actin cDNA as an hybridization probe. The nucleotide sequences of two overlapping recombinant clones were identical and the amino acid sequence deduced from the single open reading frame was 85 % identical to the P. falciparum actin I and human gamma-actin proteins. The predicted 42 106-Da Cryptosporidium actin contains 376 amino acids and is encoded by a single-copy gene which contains no introns. The nucleic acid coding sequence is 72% biased to the use of A or T in the third position of codons. Chromosome-sized DNA released from intact C. parvum oocysts was resolved by OFAGE into 5 discrete ethidium bromide-staining DNAs ranging in size from 900 to 1400 kb; the cloned C. parvum actin gene hybridized to a single chromosomal DNA of approximately 1200 kb.

摘要

肌动蛋白是一种普遍存在且高度保守的微丝蛋白,据推测它在子孢子的异常滑行运动及其对宿主细胞的主动穿透过程中发挥着机械性的、产生力的作用。我们以鸡β - 肌动蛋白cDNA作为杂交探针,从微小隐孢子虫基因组DNA文库中鉴定并分离出了一个肌动蛋白基因。两个重叠重组克隆的核苷酸序列相同,从单一开放阅读框推导的氨基酸序列与恶性疟原虫肌动蛋白I和人γ - 肌动蛋白蛋白的相似度为85%。预测的42106 - Da微小隐孢子虫肌动蛋白含有376个氨基酸,由一个无内含子的单拷贝基因编码。核酸编码序列在密码子第三位对A或T的使用偏好性为72%。从完整的微小隐孢子虫卵囊中释放出的染色体大小的DNA通过正交场交变凝胶电泳(OFAGE)分离为5条离散的溴化乙锭染色DNA,大小范围从900到1400 kb;克隆的微小隐孢子虫肌动蛋白基因与一条大小约为1200 kb的单一染色体DNA杂交。

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