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Sculpting the proteome with AAA(+) proteases and disassembly machines.
Cell. 2004 Oct 1;119(1):9-18. doi: 10.1016/j.cell.2004.09.020.
2
Machines of destruction - AAA+ proteases and the adaptors that control them.
Subcell Biochem. 2013;66:3-33. doi: 10.1007/978-94-007-5940-4_1.
5
AAA+ molecular machines: firing on all cylinders.
Curr Biol. 2006 Jan 24;16(2):R46-8. doi: 10.1016/j.cub.2006.01.005.
6
An intersubunit signaling network coordinates ATP hydrolysis by m-AAA proteases.
Mol Cell. 2009 Sep 11;35(5):574-85. doi: 10.1016/j.molcel.2009.07.018.
7
Roles of conserved arginines in ATP-binding domains of AAA+ chaperone ClpB from Thermus thermophilus.
FEBS J. 2011 Jul;278(13):2395-403. doi: 10.1111/j.1742-4658.2011.08167.x. Epub 2011 May 31.
10
AAA+ proteases: ATP-fueled machines of protein destruction.
Annu Rev Biochem. 2011;80:587-612. doi: 10.1146/annurev-biochem-060408-172623.

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Maintaining the Integral Membrane Proteome: Revisiting the Functional Repertoire of Integral Membrane Proteases.
Chembiochem. 2025 May 5;26(9):e202500048. doi: 10.1002/cbic.202500048. Epub 2025 Mar 18.
2
Proteomic analysis of unicellular cyanobacterium ATCC 51142 under extended light or dark growth.
bioRxiv. 2024 Jul 29:2024.07.29.605499. doi: 10.1101/2024.07.29.605499.
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Toxin-based screening of C-terminal tags in reveals the exceptional potency of ssrA-like degrons.
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No fitness cost entailed by type VI secretion system synthesis, assembly, contraction, or disassembly in enteroaggregative .
J Bacteriol. 2023 Dec 19;205(12):e0035723. doi: 10.1128/jb.00357-23. Epub 2023 Nov 16.
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A concerted ATPase cycle of the protein transporter AAA-ATPase Bcs1.
Nat Commun. 2023 Oct 11;14(1):6369. doi: 10.1038/s41467-023-41806-5.
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Interactome Analysis Identifies MSMEI_3879 as a Substrate of Mycolicibacterium smegmatis ClpC1.
Microbiol Spectr. 2023 Aug 17;11(4):e0454822. doi: 10.1128/spectrum.04548-22. Epub 2023 Jun 21.
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It's ok to be outnumbered - sub-stoichiometric modulation of homomeric protein complexes.
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FtsH degrades dihydrofolate reductase by recognizing a partially folded species.
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本文引用的文献

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Nucleotide-dependent substrate handoff from the SspB adaptor to the AAA+ ClpXP protease.
Mol Cell. 2004 Nov 5;16(3):343-50. doi: 10.1016/j.molcel.2004.10.001.
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An unstructured initiation site is required for efficient proteasome-mediated degradation.
Nat Struct Mol Biol. 2004 Sep;11(9):830-7. doi: 10.1038/nsmb814. Epub 2004 Aug 15.
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SspB delivery of substrates for ClpXP proteolysis probed by the design of improved degradation tags.
Proc Natl Acad Sci U S A. 2004 Aug 17;101(33):12136-41. doi: 10.1073/pnas.0404733101. Epub 2004 Aug 5.
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Substrate recognition by the AAA+ chaperone ClpB.
Nat Struct Mol Biol. 2004 Jul;11(7):607-15. doi: 10.1038/nsmb787. Epub 2004 Jun 20.
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Communication between ClpX and ClpP during substrate processing and degradation.
Nat Struct Mol Biol. 2004 May;11(5):404-11. doi: 10.1038/nsmb752. Epub 2004 Apr 4.
8
Bivalent tethering of SspB to ClpXP is required for efficient substrate delivery: a protein-design study.
Mol Cell. 2004 Feb 13;13(3):443-9. doi: 10.1016/s1097-2765(04)00027-9.
9
Distinct peptide signals in the UmuD and UmuD' subunits of UmuD/D' mediate tethering and substrate processing by the ClpXP protease.
Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13219-24. doi: 10.1073/pnas.2235804100. Epub 2003 Oct 31.

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