Kim Jinsoo, Seo Jungmin, Lee Young Seek, Kim Sangsoo
National Genome Information Center KRIBB, Daejeon, Korea.
Bioinformatics. 2005 Feb 15;21(4):548-50. doi: 10.1093/bioinformatics/bti048. Epub 2004 Oct 5.
TFExplorer is a web-based integrated database for predicted regulatory elements in human, mouse and rat. It shows predicted binding sites of transcription factors in the promoter regions, along with their phylogenetic footprinting information. In addition, TFExplorer can search for genes that have a given sequence pattern in their promoter regions using the motif-searching method.
TFExplorer is freely available at http://mars.kribb.re.kr:8080/tfExplorer/
TFExplorer是一个基于网络的综合数据库,用于预测人类、小鼠和大鼠中的调控元件。它展示了转录因子在启动子区域的预测结合位点及其系统发育足迹信息。此外,TFExplorer可以使用基序搜索方法搜索在其启动子区域具有给定序列模式的基因。
TFExplorer可在http://mars.kribb.re.kr:8080/tfExplorer/免费获取。