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揭示生物分子非理想行为的基础。

Uncovering the basis for nonideal behavior of biological molecules.

作者信息

Rösgen Jörg, Pettitt Bernard Montgomery, Bolen David Wayne

机构信息

Department of Human Biological Chemistry and Genetics, University of Texas Medical Branch, 5.154 Medical Research Building, Galveston, Texas 77555-1052, USA.

出版信息

Biochemistry. 2004 Nov 16;43(45):14472-84. doi: 10.1021/bi048681o.

Abstract

The molecular origin of the nonideal behavior for concentrated binary solutions of biochemical compounds is examined. The difference between activities expressed in the molar and molal conventions can be large. Considering the range from dilute to concentrated, we show that molar activity coefficients can be represented by simple but rigorous equations involving between one and three parameters only. We derive a universal relationship interconverting the scales of molarity and molality without requiring the density of the solution. The equations are developed from first principles using a statistical thermodynamic theory of molar activity coefficients. It is shown how to express activity coefficients in different concentration scales, and the advantages and disadvantages of using certain scales are discussed and compared with the experimental data. Several classes of biochemically relevant compounds, many of which are naturally occurring osmolytes, are discussed: six saccharides (glucose, xylose, maltose, mannose, raffinose, and sucrose), four polyols (glycerol, mannitol, erythritol, and sorbitol), five amino acids (glycine, alanine, sarcosine, glycine betaine, and proline), and urea. Of the 16 solutes, 10 could be described in terms of a single parameter that is due to pure first-order effects (packing, hydration, or space limitation). The remaining six exhibit significant second-order effects (solute-solute interactions) and require two additional parameters, one typically identified with the volume occupied per solute molecule in the pure solute (crystal or liquid) and the other with a self-association constant. The activity coefficients of the osmolytes roughly display the rank order found with respect to their ability to stabilize proteins. These findings are discussed in terms of the physical principles that give rise to the activity coefficients.

摘要

研究了生化化合物浓二元溶液非理想行为的分子起源。以摩尔和质量摩尔浓度表示的活度之间的差异可能很大。考虑从稀溶液到浓溶液的范围,我们表明摩尔活度系数可以由仅涉及一到三个参数的简单而严格的方程表示。我们推导了一个通用关系,无需溶液密度即可相互转换摩尔浓度和质量摩尔浓度的标度。这些方程是从第一原理出发,使用摩尔活度系数的统计热力学理论推导出来的。展示了如何在不同浓度标度下表示活度系数,并讨论了使用某些标度的优缺点,并与实验数据进行了比较。讨论了几类与生化相关的化合物,其中许多是天然存在的渗透剂:六种糖类(葡萄糖、木糖、麦芽糖、甘露糖、棉子糖和蔗糖)、四种多元醇(甘油、甘露醇、赤藓糖醇和山梨醇)、五种氨基酸(甘氨酸、丙氨酸、肌氨酸、甘氨酸甜菜碱和脯氨酸)以及尿素。在这16种溶质中,10种可以用一个单一参数来描述,该参数归因于纯粹的一级效应(堆积、水合或空间限制)。其余六种表现出显著的二级效应(溶质 - 溶质相互作用),需要另外两个参数,一个通常与纯溶质(晶体或液体)中每个溶质分子占据的体积相关,另一个与自缔合常数相关。渗透剂的活度系数大致显示出与其稳定蛋白质能力相关的排序。根据产生活度系数的物理原理讨论了这些发现。

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