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可视化实验小鼠:获取表型信息。

Visualizing the laboratory mouse: capturing phenotype information.

作者信息

Strivens Mark, Eppig Janan T

机构信息

Informatics Group, Mammalian Genetics Unit, UK Mouse Genome Centre, Harwell, Oxfordshire, OX11 ORD, UK.

出版信息

Genetica. 2004 Sep;122(1):89-97. doi: 10.1007/s10709-004-1435-7.

Abstract

A concerted effort to develop myriad new phenotypic alleles through mutagenesis programs presents new challenges for the biomedical community and for the informatics infrastructure needed to support this work. To handle and co-ordinate large programs of treatment, breeding, and sequential or longitudinal testing for a variety of obvious and subtle traits requires sophisticated data management software. Further, trait analyses, heritability testing, and animal availability and status must be captured and disseminated to the wider community. The Mouse Genome Database (MGD) will serve as the central integration point for the various mutagenesis programs, registering new alleles, providing accession identifiers, and capturing phenotypic descriptions. In addition, MGD will provide public access to unified searches over all alleles with links to the centres of origin for detailed testing data.

摘要

通过诱变计划协同努力开发无数新的表型等位基因,给生物医学界以及支持这项工作所需的信息基础设施带来了新的挑战。要处理和协调针对各种明显和细微特征的大型治疗、育种以及连续或纵向测试计划,需要复杂的数据管理软件。此外,必须收集性状分析、遗传力测试以及动物可用性和状态等信息,并传播给更广泛的群体。小鼠基因组数据库(MGD)将作为各种诱变计划的中央集成点,登记新的等位基因,提供登录标识符,并记录表型描述。此外,MGD将提供公共访问权限,以便对所有等位基因进行统一搜索,并链接到详细测试数据的来源中心。

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