• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用2-氨基-6-乙烯基嘌呤衍生物进行杂交促进和胞苷选择性活化以实现交联

Hybridization-promoted and cytidine-selective activation for cross-linking with the use of 2-amino-6-vinylpurine derivatives.

作者信息

Kawasaki Takeshi, Nagatsugi Fumi, Ali Md Monsur, Maeda Minoru, Sugiyama Kumiko, Hori Kenji, Sasaki Shigeki

机构信息

Graduate School of Pharmaceutical Sciences, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan.

出版信息

J Org Chem. 2005 Jan 7;70(1):14-23. doi: 10.1021/jo048298p.

DOI:10.1021/jo048298p
PMID:15624902
Abstract

Recently, we have proposed a new concept for cross-linking agents with inducible reactivity, in which the highly reactive cross-linking agent, the 2-amino-6-vinylpurine nucleoside analogue (1), can be regenerated in situ from its stable precursors, the phenylsulfide (4) and the phenylsulfoxide (3) derivatives, by a hybridization-promoted activation process with selectivity to cytidine. The phenylsulfide precursor (4) exhibited cross-linking ability despite its high stability toward strong nucleophiles such as amines and thiols. In this study, we investigated the substituent effects of the phenylsulfide group on the cross-linking reaction, and determined the 2-carboxy substituent of the phenylsulfide derivative (11k) as an efficient cross-linking agent with inducible reactivity. Detailed investigations have shown that the phenylsulfoxide (3) and phenylsulfide (4) precursors produce the 2-amino-6-vinylpurine nucleoside (1) as the common reactive species. It has been concluded that the nature of the inducible reactivity of the precursors (3 and 4) is acceleration of their elimination to the 2-amino-6-vinylpurine nucleoside (1) through the selective process in the duplex with the ODN having cytidine at the target site.

摘要

最近,我们提出了一种具有可诱导反应性的交联剂新概念,其中高反应性交联剂2-氨基-6-乙烯基嘌呤核苷类似物(1)可通过与胞苷具有选择性的杂交促进活化过程,从其稳定前体苯硫醚(4)和苯亚砜(3)衍生物原位再生。尽管苯硫醚前体(4)对胺和硫醇等强亲核试剂具有高稳定性,但仍表现出交联能力。在本研究中,我们研究了苯硫醚基团对交联反应的取代基效应,并确定苯硫醚衍生物(11k)的2-羧基取代基为具有可诱导反应性的有效交联剂。详细研究表明,苯亚砜(3)和苯硫醚(4)前体产生2-氨基-6-乙烯基嘌呤核苷(1)作为共同的反应物种。已经得出结论,前体(3和4)的可诱导反应性的本质是通过与在靶位点具有胞苷的ODN在双链体中的选择性过程加速它们消除为2-氨基-6-乙烯基嘌呤核苷(1)。

相似文献

1
Hybridization-promoted and cytidine-selective activation for cross-linking with the use of 2-amino-6-vinylpurine derivatives.使用2-氨基-6-乙烯基嘌呤衍生物进行杂交促进和胞苷选择性活化以实现交联
J Org Chem. 2005 Jan 7;70(1):14-23. doi: 10.1021/jo048298p.
2
Efficient cross-linking to cytidine using substituted phenylsulfide derivatives of 2-amino-6-vinylpurine nucleoside via synchronous activation within duplex.
Nucleic Acids Symp Ser. 2000(44):129-30. doi: 10.1093/nass/44.1.129.
3
Site-directed alkylation to cytidine within duplex by the oligonucleotides containing functional nucleobases.
Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):915-9. doi: 10.1081/NCN-100002458.
4
Novel cross-linking reaction of oligonucleotides incorporating new base analogs with selective reactivity toward cytidine.包含对胞苷具有选择性反应性的新碱基类似物的寡核苷酸的新型交联反应。
Nucleic Acids Symp Ser. 1997(37):67-8.
5
Novel drug releasing system triggered by hybridization with target sequence.
Nucleic Acids Symp Ser (Oxf). 2006(50):143-4. doi: 10.1093/nass/nrl071.
6
Synthesis of the peptide nucleic acid (PNA) incorporating 2-amino-6-vinylpurine derivative and evaluation of the reactivity.包含2-氨基-6-乙烯基嘌呤衍生物的肽核酸(PNA)的合成及反应活性评估。
Nucleic Acids Symp Ser (Oxf). 2008(52):391-2. doi: 10.1093/nass/nrn199.
7
Substituent effects on the in situ activation of the double activated cross-linking reaction.取代基对双活化交联反应原位活化的影响。
Nucleic Acids Symp Ser (Oxf). 2005(49):175-6. doi: 10.1093/nass/49.1.175.
8
Development of the novel drug releasing system triggered by hybridization with target sequence.
Nucleosides Nucleotides Nucleic Acids. 2007;26(6-7):799-803. doi: 10.1080/15257770701503597.
9
Design and synthesis of the novel cross-linking agent.新型交联剂的设计与合成。
Nucleic Acids Symp Ser (Oxf). 2009(53):169-70. doi: 10.1093/nass/nrp085.
10
A new reactive nucleoside analogue for highly reactive and selective cross-linking reaction to cytidine under neutral conditions.
Bioorg Med Chem Lett. 2001 Oct 8;11(19):2577-9. doi: 10.1016/s0960-894x(01)00505-4.

引用本文的文献

1
The Development of Non-natural Type Nucleoside to Stabilize Triplex DNA Formation against CG and TA Inversion Site.开发非天然类型核苷以稳定三联体 DNA 形成,防止 CG 和 TA 反转位点。
Curr Med Chem. 2024;31(19):2663-2686. doi: 10.2174/0929867330666230512114130.
2
Reactive OFF-ON type alkylating agents for higher-ordered structures of nucleic acids.用于核酸高级结构的反应性 ON-OFF 型烷化剂。
Nucleic Acids Res. 2019 Jul 26;47(13):6578-6589. doi: 10.1093/nar/gkz512.
3
Synthesis of native-like crosslinked duplex RNA and study of its properties.
天然样交联双链RNA的合成及其性质研究。
Bioorg Med Chem. 2017 Apr 1;25(7):2191-2199. doi: 10.1016/j.bmc.2017.02.034. Epub 2017 Feb 21.
4
Photouncaged Sequence-specific Interstrand DNA Cross-Linking with Photolabile 4-oxo-enal-modified Oligonucleotides.利用光不稳定的4-氧代烯醛修饰的寡核苷酸进行光解笼序列特异性链间DNA交联
Sci Rep. 2015 May 28;5:10473. doi: 10.1038/srep10473.
5
4-vinyl-substituted pyrimidine nucleosides exhibit the efficient and selective formation of interstrand cross-links with RNA and duplex DNA.4-乙烯基取代嘧啶核苷与 RNA 和双链 DNA 有效且选择性地形成链间交联。
Nucleic Acids Res. 2013 Jul;41(13):6774-81. doi: 10.1093/nar/gkt197. Epub 2013 Jun 18.
6
Trioligonucleotide reagents: addressed RNA modification.三寡核苷酸试剂:靶向RNA修饰
Dokl Biochem Biophys. 2010 Jan-Feb;430:53-6. doi: 10.1134/s1607672910010151.
7
Furan-modified oligonucleotides for fast, high-yielding and site-selective DNA inter-strand cross-linking with non-modified complements.用于与未修饰互补链进行快速、高产率和位点选择性DNA链间交联的呋喃修饰寡核苷酸。
Nucleic Acids Res. 2009 Apr;37(5):1555-65. doi: 10.1093/nar/gkn1077. Epub 2009 Jan 16.
8
Interstrand cross-link formation in duplex and triplex DNA by modified pyrimidines.修饰嘧啶在双链和三链DNA中形成链间交联。
J Am Chem Soc. 2008 Aug 6;130(31):10299-306. doi: 10.1021/ja802177u. Epub 2008 Jul 12.